Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_I18
         (448 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   0.99 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   0.99 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   4.0  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 0.99
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +1

Query: 55  ETDCSIPCYVHSNRSKDLAGRNVESCFSLTVKQSKPAVLNVLGSVTIRLAF 207
           ET  + P Y  S+ S+     NVE   +L VK   P    V+G  T    F
Sbjct: 288 ETGHNAPLYSPSSDSQYQKQLNVEHAANLWVKLGTPKEKLVIGMPTYGRTF 338


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 0.99
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 100 KDLAGRNVESCFSLTVKQSK-PAVLNVLGSVTIR 198
           + L  +N E CFSL +K  K P  L  +  V ++
Sbjct: 515 RTLGNQNSEMCFSLKLKNKKLPPFLAEIWDVDLK 548


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 100 KDLAGRNVESCFSLTVKQS 156
           +DLA RNV  C + TVK S
Sbjct: 616 RDLAARNVLVCENHTVKVS 634


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 3   VSCLFIFSXAVIVVCE 50
           VS +F+F+  +I++C+
Sbjct: 243 VSLIFLFNCTLIIMCD 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,347
Number of Sequences: 336
Number of extensions: 1337
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)