Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_I18
         (448 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21323-5|AAA62550.1|  124|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z83120-9|CAB05589.2|  773|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z81515-11|CAB04199.2|  773|Caenorhabditis elegans Hypothetical p...    27   8.2  
AF011893-1|AAC27124.1|  773|Caenorhabditis elegans maternal-effe...    27   8.2  

>U21323-5|AAA62550.1|  124|Caenorhabditis elegans Hypothetical
           protein C45G9.7 protein.
          Length = 124

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 106 LAGRNVESCFSLTVKQSKPAVLNVLGSVTIRLAF 207
           + G  +E C S+ V+  K  V++  G VTIR+ F
Sbjct: 7   MPGEAIE-CLSIAVELHKQEVIDAHGQVTIRVGF 39


>Z83120-9|CAB05589.2|  773|Caenorhabditis elegans Hypothetical
           protein R06A4.7 protein.
          Length = 773

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 81  CSLKSKQRFGWA*CGVLFQSHSETIQACCA*CSWQCNDSTC 203
           C +   QRF    C    Q +++  Q  C   +W+CN  TC
Sbjct: 558 CDINCSQRFPGCNCAA-GQCYTKACQ--CYRANWECNPMTC 595


>Z81515-11|CAB04199.2|  773|Caenorhabditis elegans Hypothetical
           protein R06A4.7 protein.
          Length = 773

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 81  CSLKSKQRFGWA*CGVLFQSHSETIQACCA*CSWQCNDSTC 203
           C +   QRF    C    Q +++  Q  C   +W+CN  TC
Sbjct: 558 CDINCSQRFPGCNCAA-GQCYTKACQ--CYRANWECNPMTC 595


>AF011893-1|AAC27124.1|  773|Caenorhabditis elegans maternal-effect
           sterile 2 protein.
          Length = 773

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 81  CSLKSKQRFGWA*CGVLFQSHSETIQACCA*CSWQCNDSTC 203
           C +   QRF    C    Q +++  Q  C   +W+CN  TC
Sbjct: 558 CDINCSQRFPGCNCAA-GQCYTKACQ--CYRANWECNPMTC 595


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,012,919
Number of Sequences: 27780
Number of extensions: 125469
Number of successful extensions: 248
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)