Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_I15
         (809 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1023 + 8840754-8842988,8843189-8843362                           33   0.27 
01_07_0205 - 41978437-41980599,41980805-41981215                       29   3.3  

>07_01_1023 + 8840754-8842988,8843189-8843362
          Length = 802

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +1

Query: 136 PNXPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKNLS 291
           P+  ++  K +NN    L    +  + ANN   L+ RF +DA+  IP +NLS
Sbjct: 481 PSKVVLPKKSKNNQRRNLVTTAVKCEEANND-PLSRRFSEDANRNIPTRNLS 531


>01_07_0205 - 41978437-41980599,41980805-41981215
          Length = 857

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -3

Query: 210 LSQKLFCELKHRIV-FALGCDERXIWTIE 127
           L  +L+CEL   +V +A  C+ER +W IE
Sbjct: 311 LRSRLYCELDDWLVSWADACEERSVWRIE 339


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,614,921
Number of Sequences: 37544
Number of extensions: 417178
Number of successful extensions: 1061
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)