Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_I15
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical ... 32 0.42
AF038615-1|AAB94149.3| 532|Caenorhabditis elegans Hypothetical ... 31 0.98
Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical p... 29 3.9
AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical... 29 3.9
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 29 5.2
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 29 5.2
U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 28 9.1
AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical ... 28 9.1
>AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical
protein ZC190.4 protein.
Length = 629
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +2
Query: 512 VIPEKSELRILQKYFP----LNSWIPKYSLRLVKLQPLFHQMFHAYLLSFHETTLRR 670
V+P +R + ++ P L W+ K LRL K PLF M + LLS ++ L R
Sbjct: 174 VVPTTRTIRTVDEHKPGMRDLGYWLKK--LRLHKYAPLFQDMTYRQLLSLNDNVLER 228
>AF038615-1|AAB94149.3| 532|Caenorhabditis elegans Hypothetical
protein R02D3.3 protein.
Length = 532
Score = 31.1 bits (67), Expect = 0.98
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +1
Query: 280 KNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVN 459
+NL KL + +AT+L +F + + ++ + +G+ N +Q R+N
Sbjct: 142 RNLEKLYQNLVATKLITPDDFWSDYYQKEGVSEDKIGINGAFLANIVQQ--EGTNGVRLN 199
Query: 460 LNPQLFNYCYSV-ALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARE 600
LNP++ YS + +++ V + E F KF S F + RE
Sbjct: 200 LNPEIIQAIYSTYPAVQKKNLELVPHEMSEENFWKKFFQSHYFHRERE 247
>Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical
protein T09E11.4 protein.
Length = 671
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 403 VPENELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNF 543
+ EN L+ + C + NL FN C +A K+++K +
Sbjct: 447 IAENHLKMFIQECGYRSYNLRAYTFNGCEPLAAFETEPHCKIQLKEY 493
>AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical
protein Y56A3A.33 protein.
Length = 365
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -3
Query: 579 LGIQEFRGKYFCKILNSDFSGITSVHQCHRVTIVEQLRVQVYSCKG 442
L +Q KY CK + S+ SG +S+ H + R + C G
Sbjct: 298 LSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELLATRHLFFYCHG 343
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 650 GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 546
G + +RG G T + A + W+S NLE N++
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 1190
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical protein
T04A11.3 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 650 GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 546
G + +RG G T + A + W+S NLE N++
Sbjct: 962 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 996
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 650 GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 546
G + +RG G T + A + W+S NLE N++
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 1190
>U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical
protein K03C7.3 protein.
Length = 191
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 95 WLTFLKASSCCSIVQMXRSSHPRAKT---ILCFNSQN 196
+L+FL S+CCSI+ SH T LC NS N
Sbjct: 43 FLSFLSFSTCCSILGWFFLSHSTMHTYFSFLCTNSTN 79
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 408 WYIHENAKKFICHFLMFR*KQ*EFSVLG 325
WY + KK +CHFL R K F V G
Sbjct: 1157 WYNVRSVKKNLCHFLRLRHKFMHFFVKG 1184
>AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical
protein Y52B11A.1 protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 420 TRFAIDMRLCTSKPEPSVVQLLLL 491
TRF I MR TSK EP++ +LL L
Sbjct: 96 TRFIISMRDFTSKEEPTLSELLNL 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,951,384
Number of Sequences: 27780
Number of extensions: 372353
Number of successful extensions: 1001
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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