Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_I15
         (809 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...   213   2e-57
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      58   7e-11
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          57   2e-10
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          54   2e-09
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      54   2e-09
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    51   1e-08
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      49   4e-08
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          49   6e-08
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   2.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   2.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   2.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.4  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   5.8  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   5.8  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score =  213 bits (520), Expect = 2e-57
 Identities = 106/236 (44%), Positives = 144/236 (61%)
 Frame = +1

Query: 94  MADVFESLELLFDRPNXPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKI 273
           MA     +  LFDRP+ P+  PKG+N   F +   +L + Y +   ++ NRFGDD   K+
Sbjct: 1   MASDKSGILYLFDRPSEPVYVPKGDNKVAFDIPPDYLPDRYRSVATQVFNRFGDDTESKL 60

Query: 274 PLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFAR 453
           P+K ++ LP+  I  QL +   FSLF+P H+++A  L+ + M +   E  D LS   + R
Sbjct: 61  PVKAIT-LPDLSIPMQLGRRQPFSLFIPAHRKIAARLIDIFMGMRTYE--DFLSVAVYCR 117

Query: 454 VNLNPQLFNYCYSVALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARETAAXXXXXXXX 633
             LNP LF Y  SVA++HR DT+ + V    EVFP K++DS +F++ARE A         
Sbjct: 118 DRLNPNLFIYALSVAILHRPDTKDLPVPPLTEVFPDKYMDSGIFSRAREEA-NVVPEGAR 176

Query: 634 XXXXXXXXYTATDLEEEHRLAYWREDIGINLHHYHWHLVYPFTANDLSIVXKDRRG 801
                   YTA+DL+ EHR+AYWREDIGINLHH+HWHLVYPF   D+ IV KDRRG
Sbjct: 177 VPIEIPRDYTASDLDVEHRVAYWREDIGINLHHWHWHLVYPF-EGDIRIVNKDRRG 231


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 58.4 bits (135), Expect = 7e-11
 Identities = 35/150 (23%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
 Frame = +1

Query: 343 SLFLPKHQEMANELLGVLMDVPEN--ELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRD 516
           ++F P + E   E+  +L ++  N  + Q    T A+AR+ +N  +F   +S+A+++R D
Sbjct: 95  AIFTPLNSEQKYEVR-MLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPD 153

Query: 517 TRKVRVKNFAEVFPSKFLDSQVFTQARET-----AAXXXXXXXXXXXXXXXXYTATDLEE 681
           T+ ++     E++P+ F DS V  +A+       ++                Y++ ++ E
Sbjct: 154 TKYMKFPAIYEIYPNYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKNMRE 213

Query: 682 ----EHRLAYWREDIGINLHHYHWHLVYPF 759
               E++L Y+ ED+ +N ++Y+   + P+
Sbjct: 214 YNDPEYKLDYFMEDVELNAYYYYMREMLPY 243


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 56.8 bits (131), Expect = 2e-10
 Identities = 35/150 (23%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
 Frame = +1

Query: 343 SLFLPKHQEMANELLGVLMDVPEN--ELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRD 516
           ++F P + E   E+  +L ++  N  + Q    T A+AR+ +N  +F   +S+A+++R D
Sbjct: 95  AIFTPLNSEQKYEVR-MLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPD 153

Query: 517 TRKVRVKNFAEVFPSKFLDSQVFTQARET-----AAXXXXXXXXXXXXXXXXYTATDLEE 681
           T+ ++     E++P+ F DS V  +A+       ++                Y++  + E
Sbjct: 154 TKYMKFPAIYEIYPNYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKYMRE 213

Query: 682 ----EHRLAYWREDIGINLHHYHWHLVYPF 759
               E++L Y+ ED+ +N ++Y+   + P+
Sbjct: 214 YNDPEYKLDYFMEDVELNAYYYYMREMLPY 243


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 54.0 bits (124), Expect = 2e-09
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
 Frame = +1

Query: 322 LPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQLFNYCYSVAL 501
           LP+   F++   + +  A  L  +L      ++    +T  +AR N+N Q++ Y  SVA+
Sbjct: 89  LPRGQVFTMMNKEMRHQAVVLFRLLYSAKTFDV--FYNTAVWARFNVNEQMYLYALSVAV 146

Query: 502 MHRRDTRKVRVKNFAEVFPSKFLDSQVFTQA-----RETAAXXXXXXXXXXXXXXXXYTA 666
           +HR DT+ +++    EV P  + + +V  +A      +TA                 YT 
Sbjct: 147 IHRPDTKLMKLPPMYEVMPHLYFNDEVMQKAYNIAMGDTADMKKTYNNIDYYLLAANYTG 206

Query: 667 TDLEE----EHRLAYWREDIGINLHHYHWHLVYP 756
             L +    E RL Y+ ED+G+N  ++  +  YP
Sbjct: 207 WYLTKHNVPEQRLNYFTEDVGLNHFYFMLNHNYP 240


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 54.0 bits (124), Expect = 2e-09
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
 Frame = +1

Query: 322 LPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQLFNYCYSVAL 501
           LP+   F++   + +  A  L  +L      ++    +T  +AR N+N Q++ Y  SVA+
Sbjct: 89  LPRGQVFTMMNKEMRHQAVVLFRLLYSAKTFDV--FYNTAVWARFNVNEQMYLYALSVAV 146

Query: 502 MHRRDTRKVRVKNFAEVFPSKFLDSQVFTQA-----RETAAXXXXXXXXXXXXXXXXYTA 666
           +HR DT+ +++    EV P  + + +V  +A      +TA                 YT 
Sbjct: 147 IHRPDTKLMKLPPMYEVMPHLYFNDEVMQKAYNIAMGDTADMKKTYNNIDYYLLAANYTG 206

Query: 667 TDLEE----EHRLAYWREDIGINLHHYHWHLVYP 756
             L +    E RL Y+ ED+G+N  ++  +  YP
Sbjct: 207 WYLTKHNVPEQRLNYFTEDVGLNHFYFMLNHNYP 240


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 51.2 bits (117), Expect = 1e-08
 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
 Frame = +1

Query: 325 PKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQLFNYCYSVALM 504
           P+   FS  + + ++  + L  +L+     + Q  L T A+ARV++N   F   +  A++
Sbjct: 88  PQGTTFSNSISQLRKEVSLLYRILLGA--KDYQTFLKTAAWARVHVNEGQFLKAFVAAVL 145

Query: 505 HRRDTRKVRVKNFAEVFPSKFLDSQVFTQARETA-AXXXXXXXXXXXXXXXXYTATDLEE 681
            R+DT+ V      E+ P   LDS+V  +A+  A                  Y+A    +
Sbjct: 146 TRQDTQSVIFPPVYEILPQHHLDSRVIQEAQNIAIQNTQGKNNQQNILIPVNYSALLSHD 205

Query: 682 EHRLAYWREDIGINLHH 732
           E +L+Y+ +DIG+  ++
Sbjct: 206 EQQLSYFTQDIGLAAYY 222


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 49.2 bits (112), Expect = 4e-08
 Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 8/168 (4%)
 Frame = +1

Query: 322 LPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQLFNYCYSVAL 501
           LP+   FSL+ P+     + L  +     + ++     T  +A+ N+N   + Y    A+
Sbjct: 91  LPRGELFSLYYPQLLREMSALFKLFYHAKDFDI--FFKTALWAKNNINEAQYIYSLYTAV 148

Query: 502 MHRRDTRKVRVKNFAEVFPSKFLDSQVFTQAR--------ETAAXXXXXXXXXXXXXXXX 657
           + R DT+ +++    E+ P  F +S+V  +A         +T                  
Sbjct: 149 ITRPDTKFIQLPPLYEMCPYFFFNSEVLQKANHALIFGKLDTKTSGKYKEYIIPANYSGW 208

Query: 658 YTATDLEEEHRLAYWREDIGINLHHYHWHLVYPFTANDLSIVXKDRRG 801
           Y   D   E++L Y+ EDIG+N +++     +PF          D RG
Sbjct: 209 YLNHDYNLENKLIYFIEDIGLNTYYFFLRQAFPFWLPSKEYDLPDYRG 256


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 48.8 bits (111), Expect = 6e-08
 Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 8/168 (4%)
 Frame = +1

Query: 322 LPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQLFNYCYSVAL 501
           LP+   FSL+ P+     + L  +     + ++     T  +A+ N+N   + Y    A+
Sbjct: 91  LPRGELFSLYYPQLLREMSALFKLFYHAKDFDI--FFKTALWAKNNINEAQYIYSLYTAV 148

Query: 502 MHRRDTRKVRVKNFAEVFPSKFLDSQVFTQAR--------ETAAXXXXXXXXXXXXXXXX 657
           + R DT+ +++    E+ P  F +S+V  +A         +T                  
Sbjct: 149 ITRPDTKFIQLPPLYEMCPYFFFNSEVLQKANHALIFGKLDTKTSGKYKEYIIPANYSGW 208

Query: 658 YTATDLEEEHRLAYWREDIGINLHHYHWHLVYPFTANDLSIVXKDRRG 801
           Y   D   E++L Y+ EDIG+N +++     +PF          D RG
Sbjct: 209 YLNHDYNLENKLNYFIEDIGLNTYYFFLRQAFPFWLPSKEYDLPDYRG 256


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +1

Query: 154 TPKGENNSVFQLTEQFLTEDYANNGIE---LNNRFGDDASEKIPLKN 285
           +P    +  +  TEQF T DY  N I    + N     +S K+  K+
Sbjct: 268 SPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +1

Query: 154 TPKGENNSVFQLTEQFLTEDYANNGIE---LNNRFGDDASEKIPLKN 285
           +P    +  +  TEQF T DY  N I    + N     +S K+  K+
Sbjct: 268 SPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +1

Query: 154 TPKGENNSVFQLTEQFLTEDYANNGIE---LNNRFGDDASEKIPLKN 285
           +P    +  +  TEQF T DY  N I    + N     +S K+  K+
Sbjct: 268 SPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNILDTQSSAKVVSKS 314


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 609  RYSTRCSTHTYYHSTRLHC 665
            R  T  ST  Y+H+   HC
Sbjct: 1669 RLDTEMSTWGYHHNVNKHC 1687


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +1

Query: 253 DDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANEL 384
           ++    + + N   LP+FK+     +  E SL    +  +A E+
Sbjct: 171 NEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEI 214


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +1

Query: 253 DDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANEL 384
           ++    + + N   LP+FK+     +  E SL    +  +A E+
Sbjct: 110 NEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEI 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,917
Number of Sequences: 438
Number of extensions: 4870
Number of successful extensions: 29
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)