Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_I10
         (536 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    77   3e-13
UniRef50_Q4YGX6 Cluster: Putative uncharacterized protein; n=1; ...    32   9.6  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 76.6 bits (180), Expect = 3e-13
 Identities = 34/58 (58%), Positives = 40/58 (68%)
 Frame = +1

Query: 136 IYGTGGLLTPLVAPMLXXXXXXXXXXXXXXXXXXYYGNLVAGSIVSQLTAAAMVAPTP 309
           IYGTGGLLTP+VAPML                  YYGN+VAGS++SQLT+AAM+APTP
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74


>UniRef50_Q4YGX6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 116

 Score = 31.9 bits (69), Expect = 9.6
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = +3

Query: 90  GASRCISGKRGRRCCNIWHWGSVDSISGSHARFQLSGNSGRKHSRCCTSILRKFSGRQHC 269
           G+  C++G    RC      G    ISGSH+    +      + RC TS LR  +G   C
Sbjct: 14  GSHSCVTGNH--RC----ETGDHSCISGSHSCVTGNHICETGNHRCVTSNLRCETGSHSC 67

Query: 270 VTVDCCCHGSPHA 308
           VT +  C    H+
Sbjct: 68  VTSNHRCETGDHS 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,142,696
Number of Sequences: 1657284
Number of extensions: 6674608
Number of successful extensions: 15092
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15083
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)