Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_I07
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L76159-1|AAA95939.1|  258|Homo sapiens FRG1 protein.                   87   3e-17
BC053997-1|AAH53997.1|  258|Homo sapiens FSHD region gene 1 prot...    87   3e-17
AF146191-1|AAD46768.1|  258|Homo sapiens FRG1 protein.                 87   3e-17
AL441988-1|CAC27358.1|  182|Homo sapiens chromosome 20 open read...    77   3e-14
AK057099-1|BAB71366.1|  163|Homo sapiens protein ( Homo sapiens ...    74   3e-13
AK055615-1|BAB70972.1|  134|Homo sapiens protein ( Homo sapiens ...    32   1.0  
AY909676-1|AAY57124.1|  121|Homo sapiens immunoglobulin heavy ch...    29   7.3  

>L76159-1|AAA95939.1|  258|Homo sapiens FRG1 protein.
          Length = 258

 Score = 87.4 bits (207), Expect = 3e-17
 Identities = 43/79 (54%), Positives = 56/79 (70%)
 Frame = +2

Query: 203 YGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVS 382
           YGKYLG++ DG+VVGRSDA+GP EQWEPV+Q+GK A+L+S + F+      D + AKS +
Sbjct: 113 YGKYLGINSDGLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKT 171

Query: 383 AGENEYCIIRSNKAKEVNK 439
           AGE E   IRS   +E  K
Sbjct: 172 AGEEEMIKIRSCAERETKK 190


>BC053997-1|AAH53997.1|  258|Homo sapiens FSHD region gene 1
           protein.
          Length = 258

 Score = 87.4 bits (207), Expect = 3e-17
 Identities = 43/79 (54%), Positives = 56/79 (70%)
 Frame = +2

Query: 203 YGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVS 382
           YGKYLG++ DG+VVGRSDA+GP EQWEPV+Q+GK A+L+S + F+      D + AKS +
Sbjct: 113 YGKYLGINSDGLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKT 171

Query: 383 AGENEYCIIRSNKAKEVNK 439
           AGE E   IRS   +E  K
Sbjct: 172 AGEEEMIKIRSCAERETKK 190


>AF146191-1|AAD46768.1|  258|Homo sapiens FRG1 protein.
          Length = 258

 Score = 87.4 bits (207), Expect = 3e-17
 Identities = 43/79 (54%), Positives = 56/79 (70%)
 Frame = +2

Query: 203 YGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVS 382
           YGKYLG++ DG+VVGRSDA+GP EQWEPV+Q+GK A+L+S + F+      D + AKS +
Sbjct: 113 YGKYLGINSDGLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKT 171

Query: 383 AGENEYCIIRSNKAKEVNK 439
           AGE E   IRS   +E  K
Sbjct: 172 AGEEEMIKIRSCAERETKK 190


>AL441988-1|CAC27358.1|  182|Homo sapiens chromosome 20 open reading
           frame 80 protein.
          Length = 182

 Score = 77.4 bits (182), Expect = 3e-14
 Identities = 41/79 (51%), Positives = 53/79 (67%)
 Frame = +2

Query: 203 YGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVS 382
           YGKYLG++ D +V G SDA+GP EQWEPV+Q+GK A+L+S + F+      D + AKS +
Sbjct: 46  YGKYLGINSDELV-GHSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGD-IEAKSKT 103

Query: 383 AGENEYCIIRSNKAKEVNK 439
           AGE E   IRS   KE  K
Sbjct: 104 AGEEEMIKIRSCAEKETKK 122


>AK057099-1|BAB71366.1|  163|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32537 fis, clone SMINT2000400, highly similar to
           Homo sapiens FRG1 mRNA. ).
          Length = 163

 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 35/65 (53%), Positives = 49/65 (75%)
 Frame = +2

Query: 203 YGKYLGVSKDGVVVGRSDAVGPMEQWEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVS 382
           YGKYLG++ D +VVGRSDA+GP EQWEPV++ GK A+ +S + F+  +  +D + AKS +
Sbjct: 50  YGKYLGINSDELVVGRSDAIGPREQWEPVFKIGKMALSTSNSCFIRYSEAED-IEAKSKT 108

Query: 383 AGENE 397
           AGE E
Sbjct: 109 AGEEE 113


>AK055615-1|BAB70972.1|  134|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31053 fis, clone HSYRA2000640, highly similar to
           Homo sapiens FRG1 mRNA. ).
          Length = 134

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = +2

Query: 278 WEPVWQDGKTAILSSLNKFMSVTPDDDSVIAKSVSAGENEYCIIRSNKAKEVNK 439
           WE   + GK A+L+S   F+      D + AKS +AGE E   IRS   +E  K
Sbjct: 16  WELHTKKGKMALLASNGCFIRCNEAGD-IEAKSKTAGEEEMIKIRSCAERETKK 68


>AY909676-1|AAY57124.1|  121|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 121

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = -3

Query: 172 FHVSQQHIHQSCFYLVN*ITDVFYCIYICN*ITRLLIFFKGFYDLVTKTFG 20
           F +S+ +   S +  +N + D    +Y C    R +I F G YD+    +G
Sbjct: 68  FTISRDNAKNSLYLQMNSLRDEDTAVYYCARCARTMIIFGGVYDIGNDYWG 118


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,643,794
Number of Sequences: 237096
Number of extensions: 1402317
Number of successful extensions: 2928
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2923
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)