Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_I06
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    27   0.20 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.8  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 33  FDSNHPLISRFTVTSSVIKHRPRQPCRCE*YKCGD 137
           +D +   ++  TV S  +K R    C+C  YKCGD
Sbjct: 100 YDPDGVRLTAETVNSMDVKLREPAECKC--YKCGD 132


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 351 CLLDILDTAGQEEYSAMRDQYMRTGEGF 434
           C L +L    + EYSA  D Y    EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 351 CLLDILDTAGQEEYSAMRDQYMRTGEGF 434
           C L +L    + EYSA  D Y    EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 351 CLLDILDTAGQEEYSAMRDQYMRTGEGF 434
           C L +L    + EYSA  D Y    EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 351 CLLDILDTAGQEEYSAMRDQYMRTGEGF 434
           C L +L    + EYSA  D Y    EGF
Sbjct: 844 CTL-LLQRGYRVEYSAASDAYTHAPEGF 870


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1

Query: 435 RILPRSACIGLSSPNTLLGQPCPGCRVNTSHRRSRLVYGTNPLS 304
           R LP S C    S ++L+   CP      S  R+ L+ G   LS
Sbjct: 77  RDLPNSRCNSRESSDSLVQPRCPSGESMLS-ERAALLRGVPTLS 119


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 350 VFTRHPGHGWP 382
           V++RHP   WP
Sbjct: 156 VYSRHPYESWP 166



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 600 PPLVPAPCXRPTTVGRTCC 544
           PP VP+P  +    GR  C
Sbjct: 273 PPQVPSPRSQRRYTGRATC 291


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 192 IYKIFFHTMSRH*KTTPQNHHTCITHI 112
           IY IFF    +H K        C+T++
Sbjct: 177 IYIIFFDMFYQHHKIVLDMGKNCVTYV 203


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 546 CPQVPWAPLPR 514
           CPQV W+  P+
Sbjct: 173 CPQVQWSATPQ 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,992
Number of Sequences: 336
Number of extensions: 3720
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)