Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_I06
(705 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 207 1e-54
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 110 2e-25
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 101 8e-23
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 95 9e-21
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 86 4e-18
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 83 3e-17
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 79 6e-16
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 74 2e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 67 2e-12
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 66 3e-12
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 65 1e-11
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 64 2e-11
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 62 1e-10
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 61 1e-10
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 61 1e-10
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 56 4e-09
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 56 5e-09
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.12
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 30 0.37
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 28 1.1
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 28 1.5
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 27 2.0
SPAC23A1.15c |sec20||SNARE Sec20|Schizosaccharomyces pombe|chr 1... 27 2.6
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 27 3.5
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 4.6
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 26 4.6
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 26 4.6
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 26 6.0
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 6.0
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 8.0
SPCC1020.07 |||haloacid dehalogenase-like hydrolase|Schizosaccha... 25 8.0
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 8.0
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 207 bits (505), Expect = 1e-54
Identities = 102/169 (60%), Positives = 128/169 (75%), Gaps = 1/169 (0%)
Frame = +3
Query: 192 SRKMTEYKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILD 371
S + EYKL KSALTIQLIQ+HFVDEYDPTIEDSYRK+ IDGE LLD+LD
Sbjct: 3 STYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLD 62
Query: 372 TAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNK 551
TAGQEEYSAMR+QYMRTGEGFLLV+ + S SF++I ++ +QI RVKD + P+VLV NK
Sbjct: 63 TAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANK 122
Query: 552 CDLQS-WAVXMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 695
CDL++ V A ++A+S + +VETSAK R+ V++AFY+LVR IR+
Sbjct: 123 CDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRR 171
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 110 bits (265), Expect = 2e-25
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 425
KS+LT+Q ++NHFV+ Y PTIE+++ K + G+ +I+DTAGQ+EYS + ++
Sbjct: 19 KSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGI 78
Query: 426 EGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL-QSWAVXMARAREVA 602
G++LV+++ S SFE + R++I E VP+V+VGNK DL AV + +A
Sbjct: 79 HGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAVTAEEGKALA 138
Query: 603 QSYNVPFVETSAKTRMGVDDAFYTLVREIRK 695
+ + E SA+ V AF ++ EI K
Sbjct: 139 NEWKCAWTEASARHNENVARAFELIISEIEK 169
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 101 bits (243), Expect = 8e-23
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Frame = +3
Query: 189 ISRKMTEY--KLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLL 359
+S K +Y KL KS L ++ ++ F + TI ++ + + +DG+ L
Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 360 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVL 539
I DTAGQE + + Y R G LL++ V KSF+++ ++ +++ +E V +L
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQ-HASENVYKIL 119
Query: 540 VGNKCDLQSWA-VXMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKXKV 704
+GNKCD + V + + +A V F+E SAKT + VD+AF+TL REI+K K+
Sbjct: 120 IGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKI 175
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 95.1 bits (226), Expect = 9e-21
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Frame = +3
Query: 210 YKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 386
+KL KS L ++ + + + Y TI ++ + ++G+T L I DTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 387 EYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL-Q 563
+ + Y R G ++V+ V SF ++ + ++I R E V +LVGNK D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA-VEGVNRLLVGNKSDMVD 127
Query: 564 SWAVXMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 695
V + A+E A S N+PF+ETSAK V+ AF T+ R+I++
Sbjct: 128 KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKE 171
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 86.2 bits (204), Expect = 4e-18
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 422
KS L ++ +N F E TI + + +V+D + I DTAGQE Y A+ Y R
Sbjct: 23 KSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRG 82
Query: 423 GEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD-LQSWAVXMARAREV 599
G L+V+ + SF+++G + ++++ D+ + ++LVGNK D L AV A+
Sbjct: 83 AVGALIVYDITKQSSFDNVGRWLKELREHADS-NIVIMLVGNKTDLLHLRAVSTEEAQAF 141
Query: 600 AQSYNVPFVETSAKTRMGVDDAFYTLVREI 689
A N+ F+ETSA V++AF T++ EI
Sbjct: 142 AAENNLSFIETSAMDASNVEEAFQTVLTEI 171
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 83.4 bits (197), Expect = 3e-17
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 422
K+++ Q + F +Y TI D K+V++D + L + DTAGQE + ++ + R
Sbjct: 21 KTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRG 80
Query: 423 GEGFLLVFAVNSAKSFEDIGSYREQI---KRVKDAEEVPMVLVGNKCDLQSWAVXMARAR 593
+ +LV+ VN++KSFE + S+R++ + E P +L+GNK D++ +++++
Sbjct: 81 ADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEEQKRMVSKSK 140
Query: 594 EVA---QSYNVPFVETSAKTRMGVDDAFYTLVR 683
+A +P+ ETSAK + V +AF T+ +
Sbjct: 141 ALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 79.0 bits (186), Expect = 6e-16
Identities = 50/152 (32%), Positives = 84/152 (55%), Gaps = 4/152 (2%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMR 419
KS+L ++ +++ F D + TI ++ Q + ID T + L+I DTAGQE Y ++ Y R
Sbjct: 27 KSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYR 86
Query: 420 TGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDL--QSWAVXMARAR 593
++V+ + A S E S+ ++++R + E + + L GNK DL + AV A A
Sbjct: 87 NANCAIVVYDITQAASLEKAKSWIKELQR-QAPEGIVIALAGNKLDLAQERRAVEKADAE 145
Query: 594 EVAQSYNVPFVETSAKTRMGVDDAFYTLVREI 689
A N+ F ETSAKT V++ F + +++
Sbjct: 146 AYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 74.1 bits (174), Expect = 2e-14
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 422
K+ L Q + F EY TI D K VV+D + L + DTAGQE + ++ + R
Sbjct: 21 KTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRG 80
Query: 423 GEGFLLVFAVNSAKSFEDIGSYREQI--KRVKDAEEVPMVLVGNKC--DLQSWAVXMARA 590
+ ++V+ VN++KSF+ + ++R++ + +D P ++VGN+ D AV + RA
Sbjct: 81 ADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAVSLHRA 140
Query: 591 REVAQS---YNVPFVETSAKTRMGVDDAFYTLVR 683
+ +S N+ E SAK V D F T+ R
Sbjct: 141 LDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 67.3 bits (157), Expect = 2e-12
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 425
K++L +F EY PT+ ++Y +DG++ L + DTAGQEEY +R
Sbjct: 21 KTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMSYAKA 80
Query: 426 EGFLLVFAVNSAKSFEDIGS-YREQIKRVKDAEEVPMVLVGNKCDLQSWAVXMARARE-- 596
L+ FA++S S E++ + + E+I + VP +LVG K DL+S V + R
Sbjct: 81 HIILVGFAIDSPDSLENVSTKWIEEINTL--CPNVPFILVGMKADLRSDPVAIEEMRRRN 138
Query: 597 -----------VAQSYNV-PFVETSAKTRMGVDDAFYTLVR 683
VAQ ++E S+ T GVDD F R
Sbjct: 139 QNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATR 179
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 66.5 bits (155), Expect = 3e-12
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 425
K++L + +F Y+PTI ++Y + +DG + L + DTAGQEEY +R
Sbjct: 26 KTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDT 85
Query: 426 EGFLLVFAVNSAKSFED-IGSYREQIKRVKDAEEVPMVLVGNKCDLQ---------SWAV 575
++ FAV+S S E+ I + ++ + V +VLV KCDL+ S +
Sbjct: 86 HVIMICFAVDSRDSLENVITKWLPEVS--SNCPGVKLVLVALKCDLRGADEEQVDHSKII 143
Query: 576 XMARAREVAQSYN-VPFVETSAKTRMGVDDAFYTLVR 683
A+ N V ++E SAK GV++AF R
Sbjct: 144 DYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 64.9 bits (151), Expect = 1e-11
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = +3
Query: 192 SRKMTEYKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDIL 368
S + ++KL K++L + + + F + Y TI D K + ++ T L +
Sbjct: 6 SFSLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 65
Query: 369 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGN 548
DTAGQE + ++ Y+R ++V+ + + SF + + E + R + ++V +VLVGN
Sbjct: 66 DTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDV-RAERGDDVIIVLVGN 124
Query: 549 KCDL-QSWAVXMARAREVAQSYNVPFVETSAK 641
K DL V + A+ + +ETSAK
Sbjct: 125 KTDLADKRQVTQEEGEKKAKELKIMHMETSAK 156
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 63.7 bits (148), Expect = 2e-11
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDG-----ETCLLDILDTAGQEEYSAMRDQ 410
KS L + ++N + D+ T+ + +++ G + L I DTAGQE++ ++
Sbjct: 22 KSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARN 81
Query: 411 YMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLQSW-AVXMAR 587
Y R G +LV+ V + SFE++ S+ I R + +VL G+K DLQ+ V
Sbjct: 82 YYRGAAGAVLVYDVTNKDSFEELSSWLSDI-RAMAPSTICVVLAGSKSDLQNQRQVSTEE 140
Query: 588 AREVAQSYNVPFV-ETSAKTRMGVDDAFYTLVREI 689
A E ++ ETS+ T V++ F ++V I
Sbjct: 141 AAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTI 175
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 61.7 bits (143), Expect = 1e-10
Identities = 36/116 (31%), Positives = 64/116 (55%)
Frame = +3
Query: 342 GETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAE 521
GE C ++ DTAGQE+ +RD Y G+ +++F V S +++++ + + RV E
Sbjct: 56 GEICF-NVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRV--CE 112
Query: 522 EVPMVLVGNKCDLQSWAVXMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVREI 689
+P+VL GNK D++ V A+A + N+ + + SAK+ + F L R++
Sbjct: 113 NIPIVLCGNKVDVKERKV-KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 61.3 bits (142), Expect = 1e-10
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 425
K+ L I N F +Y PT+ D+Y V+I E L + DTAGQE+Y +R
Sbjct: 16 KTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQT 75
Query: 426 EGFLLVFAVNSAKSFEDI-GSYREQIKRVKDAEEVPMVLVGNKCDLQ 563
+ FL+ F+V S SFE++ + ++ VP ++VG + DL+
Sbjct: 76 DVFLVCFSVTSPASFENVKEKWFPEVHH--HCPGVPCLIVGTQIDLR 120
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 61.3 bits (142), Expect = 1e-10
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 16/179 (8%)
Frame = +3
Query: 192 SRKMTEYKLXXXXXXXXXKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDIL- 368
S+ T KL K+ L I F + Y PT+ ++Y + + ++++
Sbjct: 9 SKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELAL 68
Query: 369 -DTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDI-GSYREQIKRVKDAEEVPMVLV 542
DTAGQEEY +R LL F+++ S ++ + +++ P+VLV
Sbjct: 69 WDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHF--CPRTPIVLV 126
Query: 543 GNKCDLQS-------------WAVXMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLV 680
G K DL+ V +A+ VA S N P+VE SAK GV++ F V
Sbjct: 127 GLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQLAV 185
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 56.4 bits (130), Expect = 4e-09
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 425
K+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R
Sbjct: 19 KTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDS 78
Query: 426 EGFLLVFAVNSAKSFEDIGSYREQIKRVKD-AEEVPMVLVGNKCDLQS------------ 566
L+ FAV+S S +++ + I V +P++LV K DL++
Sbjct: 79 HVILICFAVDSPDSLDNV--QEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSKTN 136
Query: 567 -WAVXMARAREVAQSYNV-PFVETSAKTRMGVDDAFYTLVR 683
V + VAQ ++E SAKT GV + F + R
Sbjct: 137 QHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATR 177
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 56.0 bits (129), Expect = 5e-09
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 425
K+ L I + F + Y PT+ ++Y V +DG L + DTAGQE+Y +R
Sbjct: 19 KTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDS 78
Query: 426 EGFLLVFAVNSAKSFEDIGSYREQIKRVKD-AEEVPMVLVGNKCDLQS------------ 566
L+ F+V++ +S +++ + I V +P++LVG K DL++
Sbjct: 79 HVVLICFSVDAPESLDNV--QEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTS 136
Query: 567 -WAVXMARAREVAQSYNV-PFVETSAKTRMGVDDAFYTLVR 683
+ + VAQ ++E SAK GV++ F T R
Sbjct: 137 QKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.5 bits (68), Expect = 0.12
Identities = 31/123 (25%), Positives = 50/123 (40%)
Frame = -3
Query: 664 ASSTPMRVLADVSTNGTL*LCATSRARAMXTAHDCRSHLLPTSTMGTSSASFTRLICSRY 485
+SST LA STN T TS A + + S+ +S++ +SS + T +
Sbjct: 151 SSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATS 210
Query: 484 EPMSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSSKHVSPSITTCLRYESSI 305
+SS + ++S S + S A SS + S+ S + TT S+
Sbjct: 211 SSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASAT 270
Query: 304 VGS 296
S
Sbjct: 271 SSS 273
Score = 29.5 bits (63), Expect = 0.49
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = -3
Query: 538 STMGTSSASFTRLICSRYEPMSSKLLALLTANTSKNPSPVRM-YWSLIAEYSSWPAVSRM 362
+T SS+S T + SS LA + N++ + SP S A SS + S
Sbjct: 66 NTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTT 125
Query: 361 SSKHVSPSITTCLRYESSIVGS 296
SS S SIT+ SSI S
Sbjct: 126 SSSLASSSITSSSLASSSITSS 147
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 29.9 bits (64), Expect = 0.37
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 456 SAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKC-DLQSW--AVXMARAREVAQSYNVPFV 626
+A + E++ +QI+ +KD V L KC +LQ+ ++ A RE QS +
Sbjct: 82 AAATPEELAEMEKQIQELKDEVSVVKTLYKEKCIELQALNNSLSPAEIREKIQSIDKEIE 141
Query: 627 ETSAK 641
ETS+K
Sbjct: 142 ETSSK 146
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 1.1
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Frame = -3
Query: 601 ATSRARAMXTAHDCRSHLLPTSTMGTSSASF------TRLICSRYEPM-SSKLLALLTAN 443
+T + +A SHL PTS +SS + T S P+ SS+ + T+N
Sbjct: 222 STEKPLLSVSALSSSSHLQPTSATSSSSRLYPSRPAPTPPASSSSSPLLSSQTVKTTTSN 281
Query: 442 TSKNPSPV---RMYWSLIAEYS----SWPAVSRMSSKHVSPSITT 329
S+ PSP+ + ++I +S + +S +KH+ P+ +T
Sbjct: 282 ASRQPSPLVSSKSTDNIIRSHSPVLLTPQTLSTSETKHIRPNNST 326
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 462 KSFEDIGSYREQIKRVKDAEEVPM 533
+S+ DIG QI+ +K+A E+P+
Sbjct: 188 ESYADIGGLESQIQEIKEAVELPL 211
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.5 bits (58), Expect = 2.0
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 408 QYMRTGEGFLLVFAVNSAKSFED--IGSYREQIKRVKDAEEVPMVLVGNKCDLQSWAVXM 581
++MR + ++FED G E K + VP VL+GN +S+
Sbjct: 587 KFMRDASNRQKALVQDEMQAFEDELAGVPNEDDTSQKGEDGVPGVLIGNNTGRRSFKPSE 646
Query: 582 ARAREVAQSYNVPFVETSA 638
A+ S PFV SA
Sbjct: 647 EAAKLSLPSRKNPFVSDSA 665
>SPAC23A1.15c |sec20||SNARE Sec20|Schizosaccharomyces pombe|chr
1|||Manual
Length = 226
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +3
Query: 462 KSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLQSWAVXMARAREVAQSYNVPFVETSAK 641
+S ++ GS++ + A +V + + AV M+ + S + +ET +
Sbjct: 106 RSMDNSGSWQSDDIYLTSASQVTAAMRDIHAQMVQ-AVDMSAENAMELSSSTNLLETLQE 164
Query: 642 TRMGVDDAFYTLVREIRKXKV 704
GV+D YT R I+ K+
Sbjct: 165 KYFGVEDVLYTSKRIIKSLKL 185
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 26.6 bits (56), Expect = 3.5
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = +3
Query: 465 SFEDIGSYREQIKRVKDAEEVPMV 536
++ D+G +EQI+R+++ E+P++
Sbjct: 177 TYGDVGGCKEQIERLREVVELPLL 200
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 4.6
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 478 MSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSSKHVSPSITT-CLRYESSI 305
+S L + LTA +S+N V + L E + + SK +SP++ C RY+SS+
Sbjct: 428 ISQSLQSSLTAESSRNKELVAGFLMLSEEIGIQKWIIQSLSK-MSPTLNDFCRRYDSSM 485
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 26.2 bits (55), Expect = 4.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 485 VSRADQASEGRGRGAHGTCGQQV 553
+ +A + G+G HG+CG+ V
Sbjct: 91 IHKASNGTNGKGGNRHGSCGKSV 113
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 26.2 bits (55), Expect = 4.6
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +3
Query: 330 VVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRV 509
V D + + LDT G + AMR + + +LV A + + + E IK +
Sbjct: 213 VPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTV----EAIKHI 268
Query: 510 KDAEEVPMVLVGNKCD 557
+ A +VP+V+ K D
Sbjct: 269 QSA-DVPVVVALTKSD 283
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 25.8 bits (54), Expect = 6.0
Identities = 24/104 (23%), Positives = 46/104 (44%)
Frame = +3
Query: 246 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 425
+ +TIQ H E ++ KQ ++ ++I+DT G +++ ++ +R
Sbjct: 110 EKGITIQSAATHCTWERTVDQIEANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVL 169
Query: 426 EGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCD 557
+G +LV S + I + Q++R VP + NK D
Sbjct: 170 DGAVLVLCAVSGVQSQTI-TVDRQMRRY----NVPRISFVNKMD 208
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 487 YEPMSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSS 356
Y+ +S+ + A + S N PVR S++AE+ AV + S
Sbjct: 672 YDSVSASISARIKRQNSLNLKPVRFRISVLAEFFGSQAVFVLES 715
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 348 TCLLDILDTAGQEEYSAMRDQYMRTGE-GFLLVFAVNSAKSFEDIGSYREQIKRVKDAEE 524
+C+LD++ T ++ Y R + M+ + G + +++AK E+ + R++ EE
Sbjct: 274 SCMLDLIQTTEEKLYEQYRQEQMKVRQYGEPKLRTIDNAKFKEEEENLRKRFTEQVRVEE 333
>SPCC1020.07 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 550 LLPTSTMGTSSASFTRLICSRYE--PMSSKLLALLTANTSKNPSPVRMYWS 404
L+ T ++ T S T +I RY P S ++ A + TSK S + + WS
Sbjct: 14 LVDTESIYTKS---TNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWS 61
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 25.4 bits (53), Expect = 8.0
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Frame = -3
Query: 595 SRARAMXTAHDCRSHLLPTSTMG-----TSSASFTRLI--CSRYEPMSSK--LLALLTAN 443
S + T+H + +P +TMG SS S + + + Y+ +SK ++L N
Sbjct: 109 SNTPSFTTSHSSSTTFVPPATMGGGLNNLSSPSSSLYLPGSASYQRSNSKNSSASILQMN 168
Query: 442 TSKNPSPVRMYWSLIAEYSSWPAVSRMS 359
T+ + P+ + ++ Y+ P+ SR S
Sbjct: 169 TTLDDIPILLRRPGLSSYTPGPSTSRRS 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,976,045
Number of Sequences: 5004
Number of extensions: 63975
Number of successful extensions: 240
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -