Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H23
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.4  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
 Frame = +2

Query: 230 ISSLNILETSKTCYESSRYLISHR-----PDSPTNSSPRCRTIRISSARSPEPRLARVSV 394
           I SL +LE   T  +++ +L +       P   TN +PR R       R  EP+  R ++
Sbjct: 277 IQSLWVLEKICTTTDAAEFLAAQEIPGQNPGEKTNIAPRERPRATDHQRRNEPKRPRPNI 336

Query: 395 TK 400
            +
Sbjct: 337 DR 338


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/56 (25%), Positives = 24/56 (42%)
 Frame = +2

Query: 161  GLSSTNKATFLQISNPSPSKTWIISSLNILETSKTCYESSRYLISHRPDSPTNSSP 328
            G S+ N    +  + P+ S T + ++ +    S T Y   +    H P  PT+  P
Sbjct: 1330 GTSNVNVVDIVTTAKPAQSTTSVSTTTSWNPGSTTNYPEWQPTEWHPPIPPTSEKP 1385


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 283 IFNFPSPGFTDEQFPAMQNYPN 348
           I N PSPG      P+ + Y N
Sbjct: 406 IANLPSPGSDQRSTPSPRVYGN 427


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 362 SPEPRLARVSVTKLLPLIPLIRTCPM*TSTRAIQVLSQMT 481
           SP  +   +S  K+L  + L  TC   TS     +L+QMT
Sbjct: 20  SPMTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFILTQMT 59


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 362 SPEPRLARVSVTKLLPLIPLIRTCPM*TSTRAIQVLSQMT 481
           SP  +   +S  K+L  + L  TC   TS     +L+QMT
Sbjct: 20  SPMTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFILTQMT 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,425
Number of Sequences: 336
Number of extensions: 2932
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)