Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H23
         (626 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.64 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.0  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    25   2.0  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 169 VDKQGDFPPNFQPESFQDLDYFFPEYFRNFENLLREFPIFNF 294
           V  QG FPP       +D+D F+    R F  + +   IF F
Sbjct: 86  VRMQGSFPPELASTPLEDIDSFYSNQ-RTFVVISKGKDIFRF 126


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
 Frame = +2

Query: 83   TTGESVPSRIKIHQAIGTAVHTA*KTGLSSTNKATFLQISNPSPSKTWIISSLNILET-S 259
            TTG +VP ++   ++   A+            +    + + P  + T++  +L  L+  +
Sbjct: 1387 TTGGAVPFKLLTKKSRDQALKAINFIEREQQQEMEIFEETKPILTTTYLKPTLAALQNEA 1446

Query: 260  KTCYESSRYLISHRPDSPTNSSPRCRTIRISSARSPE 370
            K+ Y+        +PDS T  +PR  T ++   + PE
Sbjct: 1447 KSSYQQ-------QPDSGTEQAPREATAQLPPVQPPE 1476


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 144 IRPERRGCRRQTRRLS 191
           +RPE RGC   T++LS
Sbjct: 186 VRPEERGCGLSTKQLS 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,664
Number of Sequences: 2352
Number of extensions: 12547
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)