BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_H23
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060741-1|AAL28289.1| 287|Drosophila melanogaster GH19142p pro... 35 0.10
AE014134-3076|AAN11033.1| 287|Drosophila melanogaster CG17549-P... 35 0.10
AE014134-3075|AAF53789.2| 262|Drosophila melanogaster CG17549-P... 35 0.10
AE014134-3074|AAF53788.1| 262|Drosophila melanogaster CG17549-P... 35 0.10
AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB... 30 2.9
AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD... 30 2.9
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA... 30 2.9
AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protei... 29 3.9
AE014296-2950|AAF49312.2| 1660|Drosophila melanogaster CG6052-PA... 29 3.9
AF521597-1|AAN62853.1| 256|Drosophila melanogaster MSP-300 prot... 29 6.8
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB... 29 6.8
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 29 6.8
U17893-1|AAA62406.1| 913|Drosophila melanogaster Spellchecker1 ... 28 9.0
BT028804-1|ABI34185.1| 917|Drosophila melanogaster RE64551p pro... 28 9.0
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr... 28 9.0
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA... 28 9.0
AE014134-2492|AAO41195.2| 752|Drosophila melanogaster CG4215-PC... 28 9.0
AE014134-2491|AAF53392.2| 917|Drosophila melanogaster CG4215-PA... 28 9.0
>AY060741-1|AAL28289.1| 287|Drosophila melanogaster GH19142p
protein.
Length = 287
Score = 34.7 bits (76), Expect = 0.10
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 529 NDNGEVKNHRAAETVVNNNGKVTKYKVEN 615
+ NG+ + R A+T VN+NGK+T Y V +
Sbjct: 259 HSNGDGTSRRGAQTTVNDNGKITSYSVHS 287
>AE014134-3076|AAN11033.1| 287|Drosophila melanogaster CG17549-PA,
isoform A protein.
Length = 287
Score = 34.7 bits (76), Expect = 0.10
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 529 NDNGEVKNHRAAETVVNNNGKVTKYKVEN 615
+ NG+ + R A+T VN+NGK+T Y V +
Sbjct: 259 HSNGDGTSRRGAQTTVNDNGKITSYSVHS 287
>AE014134-3075|AAF53789.2| 262|Drosophila melanogaster CG17549-PC,
isoform C protein.
Length = 262
Score = 34.7 bits (76), Expect = 0.10
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 529 NDNGEVKNHRAAETVVNNNGKVTKYKVEN 615
+ NG+ + R A+T VN+NGK+T Y V +
Sbjct: 234 HSNGDGTSRRGAQTTVNDNGKITSYSVHS 262
>AE014134-3074|AAF53788.1| 262|Drosophila melanogaster CG17549-PB,
isoform B protein.
Length = 262
Score = 34.7 bits (76), Expect = 0.10
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 529 NDNGEVKNHRAAETVVNNNGKVTKYKVEN 615
+ NG+ + R A+T VN+NGK+T Y V +
Sbjct: 234 HSNGDGTSRRGAQTTVNDNGKITSYSVHS 262
>AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB,
isoform B protein.
Length = 1374
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 272 ESSRY--LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 382
ES+ Y L+ +PDSP N++P T SS+++P P+LA
Sbjct: 396 ESNLYGGLLPPKPDSPVNTTP-TPTPNPSSSQAPTPQLA 433
>AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD,
isoform D protein.
Length = 1450
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 272 ESSRY--LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 382
ES+ Y L+ +PDSP N++P T SS+++P P+LA
Sbjct: 472 ESNLYGGLLPPKPDSPVNTTP-TPTPNPSSSQAPTPQLA 509
>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
isoform A protein.
Length = 2786
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 272 ESSRY--LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 382
ES+ Y L+ +PDSP N++P T SS+++P P+LA
Sbjct: 1808 ESNLYGGLLPPKPDSPVNTTP-TPTPNPSSSQAPTPQLA 1845
>AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protein
protein.
Length = 1462
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 272 ESSRY--LISHRPDSPTNSSPRCRTIRISSARSPEPRLA 382
ES+ Y L+ +PDSP N++P T SS+++P P LA
Sbjct: 484 ESNLYGGLLPPKPDSPVNTTP-TPTPNPSSSQAPTPHLA 521
>AE014296-2950|AAF49312.2| 1660|Drosophila melanogaster CG6052-PA
protein.
Length = 1660
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 157 LSGRMYRRTYCLMNLDTRRHRLPCCW 80
L+GR YCL+ RRH P CW
Sbjct: 1381 LTGRETLNIYCLLRGVQRRHVTPICW 1406
>AF521597-1|AAN62853.1| 256|Drosophila melanogaster MSP-300
protein.
Length = 256
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 169 RQPRLSGRMYRRTYCLMNLDTRRHRLPCCWVELMN*TTADVLTTNPP 29
R P GR+ RR + L N +T L ++L+N AD++ PP
Sbjct: 51 RLPVEKGRVLRRPHFLSNANTALQFLASKRIKLVNINPADLVDGRPP 97
>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
isoform B protein.
Length = 7744
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 169 RQPRLSGRMYRRTYCLMNLDTRRHRLPCCWVELMN*TTADVLTTNPP 29
R P GR+ RR + L N +T L ++L+N AD++ PP
Sbjct: 51 RLPVEKGRVLRRPHFLSNANTALQFLASKRIKLVNINPADLVDGRPP 97
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 169 RQPRLSGRMYRRTYCLMNLDTRRHRLPCCWVELMN*TTADVLTTNPP 29
R P GR+ RR + L N +T L ++L+N AD++ PP
Sbjct: 51 RLPVEKGRVLRRPHFLSNANTALQFLASKRIKLVNINPADLVDGRPP 97
>U17893-1|AAA62406.1| 913|Drosophila melanogaster Spellchecker1
protein.
Length = 913
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -3
Query: 378 SRGSGERA--ELIRIVLHRGELFVGESGRWEIKYR 280
S+G+ E A EL+ + +R E++V S WEI+YR
Sbjct: 84 SKGNFELAVRELLLVRNYRVEVYVKNSSDWEIEYR 118
>BT028804-1|ABI34185.1| 917|Drosophila melanogaster RE64551p
protein.
Length = 917
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -3
Query: 378 SRGSGERA--ELIRIVLHRGELFVGESGRWEIKYR 280
S+G+ E A EL+ + +R E++V S WEI+YR
Sbjct: 88 SKGNFELAVRELLLVRNYRVEVYVKNSSDWEIEYR 122
>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
protein.
Length = 1795
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Frame = +2
Query: 200 SNPSPSKTWIISSLNILETSKTCYESSRYLISHRPDSPTNSSPRCRTIRISSAR----SP 367
+ P PS T +S T KT S + ++PT +S + + S+ R +
Sbjct: 841 TTPKPSTTTPKTSTVASSTEKTTISSPKPTTEKSTENPTTNSVKTSALTSSTQRATSTTS 900
Query: 368 EPRLARVSVTKLLPLIPLIRTCPM*TSTRAIQVLSQMTV 484
EP ++T P ++T +T + Q +S +T+
Sbjct: 901 EPTKTTQNITTTTPKPTTLKTSTQ-EATTSTQKVSTVTI 938
>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
protein.
Length = 1795
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Frame = +2
Query: 200 SNPSPSKTWIISSLNILETSKTCYESSRYLISHRPDSPTNSSPRCRTIRISSAR----SP 367
+ P PS T +S T KT S + ++PT +S + + S+ R +
Sbjct: 841 TTPKPSTTTPKTSTVASSTEKTTISSPKPTTEKSTENPTTNSVKTSALTSSTQRATSTTS 900
Query: 368 EPRLARVSVTKLLPLIPLIRTCPM*TSTRAIQVLSQMTV 484
EP ++T P ++T +T + Q +S +T+
Sbjct: 901 EPTKTTQNITTTTPKPTTLKTSTQ-EATTSTQKVSTVTI 938
>AE014134-2492|AAO41195.2| 752|Drosophila melanogaster CG4215-PC,
isoform C protein.
Length = 752
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -3
Query: 378 SRGSGERA--ELIRIVLHRGELFVGESGRWEIKYR 280
S+G+ E A EL+ + +R E++V S WEI+YR
Sbjct: 88 SKGNFELAVRELLLVRNYRVEVYVKNSSDWEIEYR 122
>AE014134-2491|AAF53392.2| 917|Drosophila melanogaster CG4215-PA,
isoform A protein.
Length = 917
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -3
Query: 378 SRGSGERA--ELIRIVLHRGELFVGESGRWEIKYR 280
S+G+ E A EL+ + +R E++V S WEI+YR
Sbjct: 88 SKGNFELAVRELLLVRNYRVEVYVKNSSDWEIEYR 122
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,564,771
Number of Sequences: 53049
Number of extensions: 573376
Number of successful extensions: 1846
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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