Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_H23
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64608-1|AAY86312.1| 62|Caenorhabditis elegans Hypothetical pr... 33 0.17
U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical ... 29 2.7
Z74474-1|CAA98954.2| 566|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 29 3.6
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 29 3.6
AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 29 3.6
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 29 3.6
AF022975-10|AAB70668.2| 661|Caenorhabditis elegans Hypothetical... 29 3.6
U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical pr... 28 4.8
AC024788-4|ABE73331.1| 305|Caenorhabditis elegans Hypothetical ... 28 4.8
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 28 6.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 6.3
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 28 6.3
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 28 6.3
AF026211-7|AAB71292.1| 306|Caenorhabditis elegans Hypothetical ... 28 6.3
Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF098997-14|AAK71402.1| 321|Caenorhabditis elegans Serpentine r... 27 8.3
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 27 8.3
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 27 8.3
AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical ... 27 8.3
>U64608-1|AAY86312.1| 62|Caenorhabditis elegans Hypothetical
protein T22B7.8 protein.
Length = 62
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 196 NFQPESFQDLDYFFPEYFRNFENLLREFPIFNFPSPGFTDEQFPAMQNY 342
+F+P++ QD D F PE NF++++ F F G DE + QNY
Sbjct: 17 SFEPDNDQDYDDFHPE---NFDDIVDAFGDFGIGDDGLYDENYDD-QNY 61
>U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical
protein T21F2.1a protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 169 RQPRLSGRMYRRTYCLMNLDTRRHRLPCCW 80
R PRL R YCL N+ H+LP W
Sbjct: 140 RDPRLD--FSDRNYCLKNISLASHKLPTMW 167
>AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical
protein Y75B8A.6 protein.
Length = 373
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +2
Query: 59 SLIHQLYPTTGESVPSR-IKIHQAIGTAVHTA*KTGLSSTNKATFLQISNPSPSKTWIIS 235
+++H P G P + +++H + V S ++A LQ ++ +P + S
Sbjct: 2 NMMHMGAPMNGGPPPPQMLQMHHPLPHHVAVFAHGSSSQNSQAPPLQAASATPP---VPS 58
Query: 236 SLNILETSKTCYESSRYLISHRPDSPTNSSPRCRTIR 346
S+N ++ +C +S+R + SHR + +S RC R
Sbjct: 59 SMNRSQSRASCPQSTREMSSHR----STTSRRCGVCR 91
>Z74474-1|CAA98954.2| 566|Caenorhabditis elegans Hypothetical
protein K10C8.1 protein.
Length = 566
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 230 ISSLNILETSKTCYESSRYLISHRPDSPTNSSP 328
I L ++ K CY+S+ Y I+HR D P P
Sbjct: 153 IELLKVMVHEK-CYQSTSYHITHRTDEPMQKIP 184
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/77 (23%), Positives = 31/77 (40%)
Frame = +2
Query: 167 SSTNKATFLQISNPSPSKTWIISSLNILETSKTCYESSRYLISHRPDSPTNSSPRCRTIR 346
SST + P+ TW++ S I++ KT + S Y + P C T+
Sbjct: 482 SSTPATPTTTYNWPTGGTTWMLPSGEIVQAHKTFFSSFNYF--QVLSESLIAYPNCTTVL 539
Query: 347 ISSARSPEPRLARVSVT 397
+ +P + R +T
Sbjct: 540 MQLIYNPRTKETRTEIT 556
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 208 ESFQDLDYFFPEYFRNFENLL 270
E F+DLD E+FRN+ENL+
Sbjct: 970 EFFEDLDQEEREHFRNYENLV 990
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical protein
C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 208 ESFQDLDYFFPEYFRNFENLL 270
E F+DLD E+FRN+ENL+
Sbjct: 970 EFFEDLDQEEREHFRNYENLV 990
>AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 91 GVGAFAYQDSSGNRYGGTYGLKDGAVVDKQGDFPPN 198
G G F+ + SG+R G G G + QG F PN
Sbjct: 38 GGGGFSSRGQSGSRTGVQQGTGGGGFNNNQGGFHPN 73
>AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 91 GVGAFAYQDSSGNRYGGTYGLKDGAVVDKQGDFPPN 198
G G F+ + SG+R G G G + QG F PN
Sbjct: 38 GGGGFSSRGQSGSRTGVQQGTGGGGFNNNQGGFHPN 73
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 91 GVGAFAYQDSSGNRYGGTYGLKDGAVVDKQGDFPPN 198
G G F+ + SG+R G G G + QG F PN
Sbjct: 38 GGGGFSSRGQSGSRTGVQQGTGGGGFNNNQGGFHPN 73
>AF022975-10|AAB70668.2| 661|Caenorhabditis elegans Hypothetical
protein K09C6.1 protein.
Length = 661
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 208 ESFQDLDYFFPEYFRNFENLL 270
E F+DLD E+FRN+ENL+
Sbjct: 565 EFFEDLDQEEREHFRNYENLV 585
>U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical
protein ZC196.3 protein.
Length = 441
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 235 FPEYFRNFENLLREFPIF-NFPSPGFTD 315
F EYFR+F+N+ RE+ F PS D
Sbjct: 274 FLEYFRDFQNVAREWKYFKRLPSESLQD 301
>AC024788-4|ABE73331.1| 305|Caenorhabditis elegans Hypothetical
protein Y46E12A.4 protein.
Length = 305
Score = 28.3 bits (60), Expect = 4.8
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +1
Query: 187 FPPNFQPESFQDLDYFFPEYFRNFENLLREFPIFNFPSPGFTDEQFPAMQNYPN 348
FPPNFQP Q Y P+Y N+ +F NF S F A N+ N
Sbjct: 253 FPPNFQPSYAQ--HYPIPDYQPNY----AQFGAENFWSLNPAPYDFTAAGNFQN 300
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 206 PSPSKTWIISSLNILETSKTCYESSRYLISHRPDSPTNSSPR 331
P+ + T + + SK ++SS + SH P P+ S PR
Sbjct: 151 PNSTPTQSVKDVLTAAASKGQFKSSAEIFSHFPSEPSPSKPR 192
>Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical
protein K04C1.2b protein.
Length = 534
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 290 ISHRPDSPTNSSPRCRTIRISSARSPE 370
IS+R D P NS+P+C + ++ SP+
Sbjct: 185 ISNRNDDPQNSTPKCSDTKKNTKISPK 211
>Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical
protein K04C1.2a protein.
Length = 525
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 290 ISHRPDSPTNSSPRCRTIRISSARSPE 370
IS+R D P NS+P+C + ++ SP+
Sbjct: 176 ISNRNDDPQNSTPKCSDTKKNTKISPK 202
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 206 PSPSKTWIISSLNILETSKTCYESSRYLISHRPDSPTNSSPR 331
P+ + T + + SK ++SS + SH P P+ S PR
Sbjct: 151 PNSTPTQSVKDVLTAAASKGQFKSSAEIFSHFPSEPSPSKPR 192
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/111 (18%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +2
Query: 86 TGESVPSRIKIHQAIGTAVHTA*KTGLSSTNKATFLQISNPSPSKTWIISSL-----NIL 250
T +PS + Q + T SS+ +T+ PSP+ T + S++ +
Sbjct: 346 TSTGIPSTVSTSQGTSSTSPIPSTTQTSSSAPSTYTSNFTPSPTTTLLTSTIAPSTQGVP 405
Query: 251 ETSKTCYESSRYLISHRPDSPTNSSPRCRTIRISSARSPE-PRLARVSVTK 400
+SK+ +S + P +P+++ + +S+ +P P+++ +++++
Sbjct: 406 TSSKSSSPNSTPTTTITPGAPSSTLGSSSSTIVSTTITPSTPKVSTLTLSQ 456
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 206 PSPSKTWIISSLNILETSKTCYESSRYLISHRPDSPTNSSPR 331
P+ + T + + SK ++SS + SH P P+ S PR
Sbjct: 151 PNSTPTQSVKDVLTAAASKGQFKSSAEIFSHFPSEPSPSKPR 192
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 206 PSPSKTWIISSLNILETSKTCYESSRYLISHRPDSPTNSSPR 331
P+ + T + + SK ++SS + SH P P+ S PR
Sbjct: 151 PNSTPTQSVKDVLTAAASKGQFKSSAEIFSHFPSEPSPSKPR 192
>AF026211-7|AAB71292.1| 306|Caenorhabditis elegans Hypothetical
protein T13B5.7 protein.
Length = 306
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +1
Query: 208 ESFQDLDYFF---PEYFRNFENLLREFPIFNF 294
++FQ L FF PE+FR F N + F FNF
Sbjct: 73 KNFQQLLKFFQNFPEFFRQFSNFFQNF-CFNF 103
>Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical
protein C41G7.4 protein.
Length = 407
Score = 27.5 bits (58), Expect = 8.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 484 YRHLAEHLNSSCTCSHWAC 428
Y ++ HLN C C +AC
Sbjct: 340 YNYMKNHLNGKCECGSFAC 358
>AF098997-14|AAK71402.1| 321|Caenorhabditis elegans Serpentine
receptor, class i protein32 protein.
Length = 321
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 238 PEYFRNFENLLREFPIFNFPS 300
PEY RNFE L+ F IF+F S
Sbjct: 170 PEYHRNFEE-LQNFAIFHFNS 189
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 26 LRRV-RCQNVCRSLIHQLYPT-TGESVPSRIKIHQAIGTAVHTA*KTGLSSTNKATFLQI 199
L+RV R N +S+I L T TGE + SR+K+ Q I K+ +S++ ++
Sbjct: 482 LKRVARDINEYKSVIPCLKSTSTGERITSRVKMEQEIEKFYTELFKSAVSNSQTSSIPAT 541
Query: 200 SNPSP 214
+ P P
Sbjct: 542 ATPPP 546
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 26 LRRV-RCQNVCRSLIHQLYPT-TGESVPSRIKIHQAIGTAVHTA*KTGLSSTNKATFLQI 199
L+RV R N +S+I L T TGE + SR+K+ Q I K+ +S++ ++
Sbjct: 221 LKRVARDINEYKSVIPCLKSTSTGERITSRVKMEQEIEKFYTELFKSAVSNSQTSSIPAT 280
Query: 200 SNPSP 214
+ P P
Sbjct: 281 ATPPP 285
>AC006805-1|AAK68515.1| 129|Caenorhabditis elegans Hypothetical
protein Y54B9A.1 protein.
Length = 129
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -3
Query: 423 IRGINGSNLVTETRASRGSGERAELIRIVLHRGELFVGESGRWE 292
+R + G ETR RG R E R HRGE GE+ R E
Sbjct: 27 LRDLRGETHRGETR--RGETRRGETHRGETHRGETHRGETHRGE 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,434,008
Number of Sequences: 27780
Number of extensions: 285648
Number of successful extensions: 958
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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