Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H17
         (750 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC609.02 |ptn1||phosphatidylinositol-3,4,5-trisphosphate3-phos...    30   0.40 
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac...    28   1.2  
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |...    27   2.2  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    27   2.9  
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ...    27   3.8  
SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1 |Schizosaccharo...    27   3.8  
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|...    26   5.0  
SPBC18A7.02c |||seven transmembrane receptor-like protein|Schizo...    26   5.0  
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca...    26   6.6  
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch...    26   6.6  
SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces pombe...    26   6.6  
SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase Ssp2|Schiz...    25   8.7  

>SPBC609.02 |ptn1||phosphatidylinositol-3,4,
           5-trisphosphate3-phosphatase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 348

 Score = 29.9 bits (64), Expect = 0.40
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 530 LLELWVMKILQVTLRETKPLFTNWIQLKMGNXRRLSKLCHYQTALLG 670
           LL LW + +    L +T+PL T  +  K G  R  + +C Y  A  G
Sbjct: 103 LLFLWAIVMNMDALFQTQPLLTLVVHCKAGKGRTGTVICSYLVAFGG 149


>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
           Vps23|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 487

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 736 HNQISLSKTAWNLCNKMPFPSSPKQGRLIMTQ 641
           H+ +SL + + N+  + P P  P+Q  +I+T+
Sbjct: 237 HDSVSLRRPSSNIPAQKPIPPKPEQNEIIITK 268


>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 661

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = +1

Query: 184 IEKITEPLTLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKHTKTSLDGRVGFIL 351
           I  + E    G  P WDE+++AL F   Q     K +P T +   T    R  F L
Sbjct: 516 ISAVDESAHQGHLPGWDEKEEALIFSLAQGMNPMK-MPLTPRRASTGPRPRPTFQL 570


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 434 LPSSPSHCIKRNLRSTPTTNWSVVPSTGNMKPTLPSKL 321
           LPS PS       R TP T  +++P  G M    P K+
Sbjct: 509 LPSEPSQNQPAEYRDTPDTPRNIMPLPGLMSADQPIKV 546


>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 570

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 564 TWRIFMTHSSSKQPPTRICFA 502
           T+R F T SS+K P   +CFA
Sbjct: 21  TFRKFTTESSTKSPIADVCFA 41


>SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 325

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 565 NFERNKASLYKLDSAKDGKLXKIIETVSLSNGL 663
           N E  K  + K     +G L   +ET++L NGL
Sbjct: 74  NNEYRKTDVVKNSDTDNGLLKSAVETITLENGL 106


>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
            3|||Manual
          Length = 1184

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -2

Query: 419  SHCIKRN--LRSTPTTNWSVVPSTGNMKPTLPSKLV 318
            SH    N  + + P  N S VP+TGN+K  L    V
Sbjct: 1095 SHAAHSNNVIGTQPHVNVSAVPNTGNLKDALEGSAV 1130


>SPBC18A7.02c |||seven transmembrane receptor-like
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 457

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 323 LVFVCFSVVGTYLCIVLSWMLTKYS 249
           ++F C  V+   L ++LSW  T+YS
Sbjct: 248 ILFACQLVLDLALLLILSWGYTRYS 272


>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
           catalytic subunit Arm1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 811

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 251 YTL*ASKIKLYTNMYQLLKNI 313
           Y + A+K K +T  YQLLKNI
Sbjct: 717 YHVSATKKKEFTRQYQLLKNI 737


>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 677

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 440 TLLPSSPSHCIKRNLRSTPTTNWSVVPSTGN 348
           T+LP   +  I    +ST TTN S  P+TG+
Sbjct: 441 TMLPIPGTRRIPTYSQSTSTTNPSATPTTGD 471


>SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 350

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 527 CLLELWVMKILQVTLRETKPLFTNWIQLKMGNXRRLSKLCHYQTALL 667
           C  E W+  IL   + E + L T+W        RRL K  + ++++L
Sbjct: 168 CRFEEWIFPILNKMVEEQETLGTHWTPSSF--IRRLGKEINDESSVL 212


>SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase
           Ssp2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 576

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +1

Query: 154 AF*PYTMSVRIEKITEPL--TLGEGPHWDERQQALYFVSIQDKTIHKYVPTTEKH 312
           AF  YT  ++ +   E +  TL EGP W       Y     D  I   VPT EK+
Sbjct: 370 AFSEYTSELQKKSKQELIDPTL-EGPRWTVSDPPTYAKQTIDSNICVLVPTAEKN 423


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,159,824
Number of Sequences: 5004
Number of extensions: 67922
Number of successful extensions: 182
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)