Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H17
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81552-2|CAB04485.1|  331|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z81552-1|CAB04484.1|  331|Caenorhabditis elegans Hypothetical pr...    28   8.1  
X94702-1|CAA64363.1|  331|Caenorhabditis elegans pes-2 protein.        28   8.1  
X94701-1|CAA64362.1|  331|Caenorhabditis elegans pes-2 protein.        28   8.1  
U88167-10|AAB42222.1|  804|Caenorhabditis elegans Hypothetical p...    28   8.1  
U88167-9|AAK68288.1|  890|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z81552-2|CAB04485.1|  331|Caenorhabditis elegans Hypothetical
           protein F56G4.3 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +1

Query: 271 DKTIHKYVPTTEKHTKTSLDGRVG--FILPVE-GTTDQFVVGVERKF-LLIQWDGEDGSK 438
           +KTI+ + PTTEK  +T    +V   FI  +  G  +   +G E     +I W  E    
Sbjct: 103 EKTINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLN 162

Query: 439 VAVLKELGEVDKD 477
           +A    +G VDK+
Sbjct: 163 IANF-TIGNVDKE 174


>Z81552-1|CAB04484.1|  331|Caenorhabditis elegans Hypothetical
           protein F56G4.2 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +1

Query: 271 DKTIHKYVPTTEKHTKTSLDGRVG--FILPVE-GTTDQFVVGVERKF-LLIQWDGEDGSK 438
           +KTI+ + PTTEK  +T    +V   FI  +  G  +   +G E     +I W  E    
Sbjct: 103 EKTINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLN 162

Query: 439 VAVLKELGEVDKD 477
           +A    +G VDK+
Sbjct: 163 IANF-TIGNVDKE 174


>X94702-1|CAA64363.1|  331|Caenorhabditis elegans pes-2 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +1

Query: 271 DKTIHKYVPTTEKHTKTSLDGRVG--FILPVE-GTTDQFVVGVERKF-LLIQWDGEDGSK 438
           +KTI+ + PTTEK  +T    +V   FI  +  G  +   +G E     +I W  E    
Sbjct: 103 EKTINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLN 162

Query: 439 VAVLKELGEVDKD 477
           +A    +G VDK+
Sbjct: 163 IANF-TIGNVDKE 174


>X94701-1|CAA64362.1|  331|Caenorhabditis elegans pes-2 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = +1

Query: 271 DKTIHKYVPTTEKHTKTSLDGRVG--FILPVE-GTTDQFVVGVERKF-LLIQWDGEDGSK 438
           +KTI+ + PTTEK  +T    +V   FI  +  G  +   +G E     +I W  E    
Sbjct: 103 EKTINIFWPTTEKEDRTFAVMKVAEHFIYTLGLGEFESVTLGQENHAGRIIDWANEKNLN 162

Query: 439 VAVLKELGEVDKD 477
           +A    +G VDK+
Sbjct: 163 IANF-TIGNVDKE 174


>U88167-10|AAB42222.1|  804|Caenorhabditis elegans Hypothetical
           protein D2092.1a protein.
          Length = 804

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 592 YKLDSAKDGKLXKIIETVSLSNGLAWDLKEKAFYYTDSMQFSITKFD 732
           Y L++A D     ++ TVS S+G    ++   F Y D     I K+D
Sbjct: 319 YHLENAPDDAQVLLLITVSGSHGAGETIETDEFNYNDIRNTRIQKYD 365


>U88167-9|AAK68288.1|  890|Caenorhabditis elegans Hypothetical
           protein D2092.1b protein.
          Length = 890

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 592 YKLDSAKDGKLXKIIETVSLSNGLAWDLKEKAFYYTDSMQFSITKFD 732
           Y L++A D     ++ TVS S+G    ++   F Y D     I K+D
Sbjct: 405 YHLENAPDDAQVLLLITVSGSHGAGETIETDEFNYNDIRNTRIQKYD 451


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,314,974
Number of Sequences: 27780
Number of extensions: 373507
Number of successful extensions: 803
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)