Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H17
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   1.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   7.1  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 123 NSEALEAPHYTVLNSDIESIVSLSAT 46
           N+E L+   Y  +N D+ S +++S+T
Sbjct: 436 NTERLQVGQYVTVNGDVVSHLNISST 461


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 174 HRIWLKGLLHFA 139
           H++WL GLL F+
Sbjct: 6   HQVWLVGLLAFS 17


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 174 HRIWLKGLLHFA 139
           H++WL GLL F+
Sbjct: 6   HQVWLVGLLAFS 17


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 322  SLDGRVGFILPVEGTTDQFVVGVE 393
            ++ GRVGF+ P E     F+ G++
Sbjct: 975  NVQGRVGFVTPFEHR--HFISGID 996


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 526 LFAGTMGHEDPPGNFERNKASLYKL 600
           +   T G+ DPP N E    +LY +
Sbjct: 519 VITSTFGNGDPPENGEAFAQNLYAM 543


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,432
Number of Sequences: 438
Number of extensions: 4712
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)