Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H14
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.12 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    26   0.29 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 11/36 (30%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -1

Query: 168 VVAVTRVDLLRSC-QSYNEDGEQNEQFREHFEQFSK 64
           ++ V R +L++ C + + E  E  + +++ +EQFSK
Sbjct: 397 ILKVIRKNLVKKCLELFEELAEDKDGYKKFYEQFSK 432


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 293 YFLKHLCY*FNKNILKNIMILLFISFEI 376
           Y+L H+C   +  ++ NI+ L+   FEI
Sbjct: 266 YYLSHVCQNVSTEVIGNILRLMHRRFEI 293


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 391 SWITFDLQNAFVLSVFFFSCQLPFCECL 474
           ++I F +   F+L +++F C L    C+
Sbjct: 271 AFIIFTMHLLFLLCIYYFYCALIILLCI 298


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 81  NVRETVHSVRRPRCSSGKT 137
           N RE+  S+ +PRC SG++
Sbjct: 85  NSRESSDSLVQPRCPSGES 103


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 299 LKHLCY*FNKNILKNIMILLFISFEILI 382
           LKH+     KN+  N ++ +F S  I+I
Sbjct: 72  LKHIFNILMKNVTLNDVVFIFCSAPIII 99


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 488 RGTNHESVFLFDIFFILSL 544
           R  ++ SVFLFDI  I++L
Sbjct: 68  RSYSNFSVFLFDIITIVTL 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,968
Number of Sequences: 336
Number of extensions: 2181
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)