Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H12
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.1  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 415 LNDVWVDFIHFVSTFVFAGFYKPDCKGII 329
           +  +WV  I+  +T++   F K  CK +I
Sbjct: 129 MTGIWVWLINISATYICYAFGKFSCKVMI 157


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 415 LNDVWVDFIHFVSTFVFAGFYKPDCKGII 329
           +  +WV  I+  +T++   F K  CK +I
Sbjct: 362 MTGIWVWLINISATYICYAFGKFSCKVMI 390


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 415 LNDVWVDFIHFVSTFVFAGFYKPDCKGII 329
           +  +WV  I+  +T++   F K  CK +I
Sbjct: 362 MTGIWVWLINISATYICYAFGKFSCKVMI 390


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 199 FISVIEFFITFHWTSV*SPYRYG 131
           F++V    I F W S  S +RYG
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRYG 597


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 199 FISVIEFFITFHWTSV*SPYRYG 131
           F++V    I F W S  S +RYG
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRYG 597


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 508 HVXLLTYAVVKLKNSFLLLTFILHLCCYKEQSI 606
           H  L T  V+ LKN +++L   L     K QS+
Sbjct: 817 HCYLATELVLMLKNRYIILNGRLIKMETKAQSV 849


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,794
Number of Sequences: 336
Number of extensions: 3042
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)