Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H12
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.8  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   6.5  
AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    23   8.7  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 242 KGMNDLCGMDLVPDPKIIKAALHACR 319
           +G+  LC +  V +  I K  LHACR
Sbjct: 618 RGITSLCAIAKVFELVIYKNLLHACR 643


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 307 KGSFDNLWVGNEIHTTEVIHSFAD 236
           KG FD  W  N+ HT E IH++ D
Sbjct: 123 KGPFD--W--NDYHTLEEIHAWLD 142


>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 358 FYKPDCKGIIIDSSACMKG 302
           +Y P+   ++ID   C KG
Sbjct: 235 YYTPNSTAVVIDPKECHKG 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,966
Number of Sequences: 2352
Number of extensions: 12722
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)