Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H11
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-3|CAB63331.1|  122|Caenorhabditis elegans Hypothetical pr...   126   9e-30
Z82077-4|CAB63332.1|   70|Caenorhabditis elegans Hypothetical pr...    85   2e-17
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    27   6.0  
AL021448-1|CAA16276.2|  898|Caenorhabditis elegans Hypothetical ...    27   8.0  
AF233290-1|AAF62516.1|  898|Caenorhabditis elegans maternal-effe...    27   8.0  

>Z82077-3|CAB63331.1|  122|Caenorhabditis elegans Hypothetical
           protein W09C5.6a protein.
          Length = 122

 Score =  126 bits (304), Expect = 9e-30
 Identities = 57/120 (47%), Positives = 80/120 (66%)
 Frame = +1

Query: 70  PKVQXKANQP*TQLLPVSSXVNLHKRLHGVGFKKRAPSAIKEIRKFAEKQMGTPDIRVDT 249
           PK + K+     +++     +++H R+ G+G KKRAP AI EI+KFA+ QM T D+RVDT
Sbjct: 3   PKNEKKSRSTINEVVTREYTIHIHARIRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDT 62

Query: 250 RLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQ 429
           +LNKF+WSKG++NVP+          N+DEDSA KL+TL TYVP  +  GL   NVD+ +
Sbjct: 63  KLNKFIWSKGIKNVPYRVRVRLSRRRNEDEDSAQKLYTLCTYVPCTNFHGLTNVNVDSEE 122


>Z82077-4|CAB63332.1|   70|Caenorhabditis elegans Hypothetical
           protein W09C5.6b protein.
          Length = 70

 Score = 85.4 bits (202), Expect = 2e-17
 Identities = 37/70 (52%), Positives = 48/70 (68%)
 Frame = +1

Query: 220 MGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKG 399
           M T D+RVDT+LNKF+WSKG++NVP+          N+DEDSA KL+TL TYVP  +  G
Sbjct: 1   MKTNDVRVDTKLNKFIWSKGIKNVPYRVRVRLSRRRNEDEDSAQKLYTLCTYVPCTNFHG 60

Query: 400 LQTENVDASQ 429
           L   NVD+ +
Sbjct: 61  LTNVNVDSEE 70


>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
           protein C34D4.14 protein.
          Length = 2761

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 183 RNQRNPKVR*KTDGNSGHSSRHSLKQIPLV*GSQKCSLPCPCEAFTKT 326
           RN+ +PKV+  T    G S++  L    LV       LP  CE F K+
Sbjct: 507 RNKEDPKVKASTSKQPGTSTKPELPNPNLVRKVLHQLLPIFCEIFQKS 554


>AL021448-1|CAA16276.2|  898|Caenorhabditis elegans Hypothetical
           protein Y2H9A.1 protein.
          Length = 898

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 58  QWLNPKVQXKANQP*TQLLPVSSXVNLHK 144
           QWL P+   K  QP   ++PVS    L K
Sbjct: 403 QWLIPQENDKEKQPLMSIVPVSDIARLTK 431


>AF233290-1|AAF62516.1|  898|Caenorhabditis elegans maternal-effect
           sterile 4 protein.
          Length = 898

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 58  QWLNPKVQXKANQP*TQLLPVSSXVNLHK 144
           QWL P+   K  QP   ++PVS    L K
Sbjct: 403 QWLIPQENDKEKQPLMSIVPVSDIARLTK 431


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,829,964
Number of Sequences: 27780
Number of extensions: 184453
Number of successful extensions: 357
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)