Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H07
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.49 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.49 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   6.0  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 376 TSP*YMKLIIAFRSSYLKFLNIITGCWQGFSLNICLK 266
           TSP  MK +++FR+    FL ++     G +  +  K
Sbjct: 64  TSPTIMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAK 100


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 376 TSP*YMKLIIAFRSSYLKFLNIITGCWQGFSLNICLK 266
           TSP  MK +++FR+    FL ++     G +  +  K
Sbjct: 64  TSPTIMKFVLSFRTGSFTFLMVVAVLSSGTTFKLVAK 100


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 357  FMYHGEVNIFQEQLESFLITAELLEVKG 440
            F YHG+  +  E ++S    AE ++ KG
Sbjct: 931  FAYHGDQWVGFEDIKSVRDKAEYIKTKG 958


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 132 NNYVSHVTEAFNALRFENDLV 194
           +NY ++ T  F+ + FEND +
Sbjct: 568 SNYFANKTYDFHNMSFENDFI 588


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 222 YHHRNIMSRPPNHS 181
           +HH ++ +RPP  S
Sbjct: 53  HHHHHLQARPPQDS 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,270
Number of Sequences: 336
Number of extensions: 3734
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)