Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_H07
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 60 1e-09
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 54 1e-07
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 52 6e-07
DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein. 50 2e-06
AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 49 3e-06
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z68316-5|CAL49438.1| 326|Caenorhabditis elegans Hypothetical pr... 38 0.008
AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical ... 37 0.018
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 36 0.031
U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical pr... 36 0.041
AC006648-11|AAF39860.2| 157|Caenorhabditis elegans Hypothetical... 35 0.054
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 35 0.071
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 33 0.16
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 33 0.16
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 33 0.16
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 33 0.22
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 33 0.22
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 33 0.29
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 33 0.29
AF025461-1|AAB70996.2| 297|Caenorhabditis elegans Hypothetical ... 32 0.50
Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical pr... 31 0.66
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 1.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 1.2
Z81070-3|CAB02998.1| 408|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41543-11|AAP40530.1| 362|Caenorhabditis elegans Hypothetical p... 30 2.0
U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z78019-1|CAB01456.1| 662|Caenorhabditis elegans Hypothetical pr... 29 2.7
U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical p... 29 3.5
U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like prot... 29 3.5
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical p... 29 4.7
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 29 4.7
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 29 4.7
AF040660-4|AAC71145.1| 323|Caenorhabditis elegans Hypothetical ... 29 4.7
Z73103-7|CAA97428.1| 416|Caenorhabditis elegans Hypothetical pr... 28 8.2
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 8.2
U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory ... 28 8.2
U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory ... 28 8.2
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 8.2
U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein. 28 8.2
U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein. 28 8.2
AY204176-1|AAO39180.1| 409|Caenorhabditis elegans nuclear recep... 28 8.2
AF025465-4|AAB71029.1| 297|Caenorhabditis elegans Hypothetical ... 28 8.2
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 60.5 bits (140), Expect = 1e-09
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +3
Query: 111 PQFSLRWNNYVSHVTEAFNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIFKEN 290
PQ + +++ + V + L+ + L DVTL C +I AHR++LSACS YF +F
Sbjct: 29 PQSKYKNSHFANSVLQQLGGLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMFTSQ 88
Query: 291 --PCQHPVIIFRNFKYEDLNAIINFMYHGEVNIFQEQLESFLITAELLEV 434
C I + L A+I F Y G + I ++ L A LL++
Sbjct: 89 MAECYMREINMEEIEPPTLEALIEFCYTGAIAIDDSNVQDILPAACLLQI 138
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Frame = +3
Query: 162 FNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPV--IIFRNFKYE 335
FN LR + L DV L + K+ AH+++L+A YFR +F + + + I + YE
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYE 100
Query: 336 DLNAIINFMYHGEVNIFQEQLESFLITAELLEV 434
++A+++F Y GE+ I ++S ++ A ++
Sbjct: 101 TVDALLSFAYTGELRITTSNVQSIMLGANFFQM 133
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = +3
Query: 162 FNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIF----KENPCQHPVIIFRNFK 329
FN LR + L DV L + K+ AH+++L+A YFR +F E + I +
Sbjct: 41 FNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMN 100
Query: 330 YEDLNAIINFMYHGEVNIFQEQLESFLITAELLEV 434
YE ++A+++F Y GE+ I ++S ++ A ++
Sbjct: 101 YETVDALLSFAYTGELRITTSNVQSIMLGANFFQM 135
>DQ338465-1|ABC67522.1| 690|Caenorhabditis elegans KEL-8 protein.
Length = 690
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 144 SHVTEAFNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHP--VIIF 317
S + E LR +L DV L G I+AHR +L+A S YF+ +F + I
Sbjct: 95 SKIMEQMRILRQTEELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIEL 154
Query: 318 RNFKYEDLNAIINFMYHGEVNIFQEQLESFLITAELLEV 434
++ E + I++++Y ++ I + + TA +L++
Sbjct: 155 QDIPEESVRIIVDYIYTDKIAITMNNVHQLIFTATVLQM 193
>AF067946-5|AAC17684.4| 690|Caenorhabditis elegans Hypothetical
protein W02G9.2 protein.
Length = 690
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 144 SHVTEAFNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHP--VIIF 317
S + E LR +L DV L G I+AHR +L+A S YF+ +F + I
Sbjct: 95 SKIMEQMRILRQTEELCDVELLVAGSVIRAHRYILAAASPYFKAMFTNGMVEMKKLTIEL 154
Query: 318 RNFKYEDLNAIINFMYHGEVNIFQEQLESFLITAELLEV 434
++ E + I++++Y ++ I + + TA +L++
Sbjct: 155 QDIPEESVRIIVDYIYTDKIAITMNNVHQLIFTATVLQM 193
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +3
Query: 225 IKAHRMLLSACSNYFRQIFKE--NPCQHPVIIFRNFKYEDLNAIINFMYHGEVNIFQEQL 398
I AHR++LSA S+YFR +F +I + E L+ +I++MY G + I ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 399 ESFLITAELLEVKGLTD 449
++ L TA LL++ + D
Sbjct: 142 QTILATASLLQLTCVRD 158
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +3
Query: 225 IKAHRMLLSACSNYFRQIFKE--NPCQHPVIIFRNFKYEDLNAIINFMYHGEVNIFQEQL 398
I AHR++LSA S+YFR +F +I + E L+ +I++MY G + I ++ +
Sbjct: 82 IHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNV 141
Query: 399 ESFLITAELLEVKGLTD 449
++ L TA LL++ + D
Sbjct: 142 QTILATASLLQLTCVRD 158
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Frame = +3
Query: 150 VTEAFNALRFENDLVDVTLCCDGGK-IKAHRMLLSACSNYFRQIFKEN---PCQHPVIIF 317
+ A N +E++L + G K IKAHR +L S F+ +F Q I
Sbjct: 204 IVRANNRSMWEDELFTDCVIHVGNKHIKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHI 263
Query: 318 RNFKYEDLNAIINFMYHGEVNIFQEQ--LESFLITAELLEVKGLTDNIEEDSAKSQIRLS 491
+ KY+ + A++ FMY G + Q ++ L A+ EV L D E A++ I L
Sbjct: 264 EDAKYDSVRAMVEFMYTGATESLESQGNIDEILAIADKYEVLMLKDQCERLIAQT-INLK 322
Query: 492 ENTSLDLSS 518
T + + S
Sbjct: 323 NVTQIAMFS 331
>U28409-2|AAN60501.1| 288|Caenorhabditis elegans Hypothetical
protein T25D10.5 protein.
Length = 288
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +3
Query: 195 DVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPV--IIFRNFKYEDLNAIINFMYH 368
D L G K+ ++ LLS S YFR +F N + + I YED + ++ +Y
Sbjct: 131 DAVLVIGGTKMHVNKALLSFHSEYFRALFSSNFKEGKLTEIPMYEVSYEDFSRMLAVLYG 190
Query: 369 GEVNIFQEQLESFLITAELLEVKGLTDNIE 458
E + + LE L A+ +V +T +IE
Sbjct: 191 NEALLKDDNLEKMLELADQFQVPRVTAHIE 220
>Z68316-5|CAL49438.1| 326|Caenorhabditis elegans Hypothetical
protein K08E4.7 protein.
Length = 326
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +3
Query: 186 DLVDVTLCCDGGKIKAHRMLLSACSNYFRQIF----KENPCQHPVIIFRNFKYEDLNAII 353
D D L + KI + L+ S YF IF KE + + KY+D+ +
Sbjct: 161 DYFDGVLLVENKKIYVQKRYLATKSTYFWNIFFGDFKEK--EQEAVEIPGVKYDDVIQFL 218
Query: 354 NFMYHGEVNIFQEQLESFLITAEL 425
NF++H + I E +E+ ++ A+L
Sbjct: 219 NFIHHTDSQINIETIENMMVLADL 242
>AF016430-5|AAB65373.1| 581|Caenorhabditis elegans Hypothetical
protein C05C8.6 protein.
Length = 581
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = +3
Query: 138 YVSHVTEAFNALRFENDLVDVTLCCDGG-KIKAHRMLLSACSNYFRQI----FKENPCQH 302
++ ++++F+ + D DVTL D G + AHR++L+ S++FR + F+E+ Q
Sbjct: 46 HLDELSQSFDEIFTSTDHSDVTLVLDDGTEFAAHRLILAVRSSFFRAMLYTGFQESHQQ- 104
Query: 303 PVIIFRNFKYEDLNAIINFMYHGEVNIFQEQLESFL 410
++ + A++ +MY +++ +L+ L
Sbjct: 105 -LVTLQETNSVAFRAVLRYMYTSKIDFAGVELDILL 139
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 36.3 bits (80), Expect = 0.023
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = +3
Query: 444 TDNIEEDSAKSQIRLSENTSLDLSSKS---SKYEDIAPVQSDEPINLAPVQSNRD--ENI 608
T ++E S++ NT SKS + D P ++ P + ++ ++
Sbjct: 308 TRDVETGSSEVTTPFGRNTESSTPSKSPGSTSSSDTTPSSNENGKETTPFEMTKNPFNDL 367
Query: 609 PQVCPVNNVSEQENGNDEASQDISRPDDSINTKVKSVLPPSEXMQV 746
+ P+ S + +DE +DIS+ DS ++ KS +P S Q+
Sbjct: 368 KTIRPIYLGSSSDEEDDEPLEDISKATDSPHSSEKSQIPGSPGSQI 413
>Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical
protein F27C8.5 protein.
Length = 565
Score = 35.9 bits (79), Expect = 0.031
Identities = 21/89 (23%), Positives = 39/89 (43%)
Frame = +3
Query: 195 DVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPVIIFRNFKYEDLNAIINFMYHGE 374
DV + G H +++ A S+ F + F + +F + + + ++MY GE
Sbjct: 36 DVKIQLKTGFDMVHSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGE 95
Query: 375 VNIFQEQLESFLITAELLEVKGLTDNIEE 461
++I + + L A L V L IE+
Sbjct: 96 IDIPETTIADVLAVASYLRVTMLQRQIEQ 124
>U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical
protein ZC239.6 protein.
Length = 258
Score = 35.5 bits (78), Expect = 0.041
Identities = 40/182 (21%), Positives = 78/182 (42%), Gaps = 4/182 (2%)
Frame = +3
Query: 216 GGK-IKAHRMLLSACSNYFR---QIFKENPCQHPVIIFRNFKYEDLNAIINFMYHGEVNI 383
GGK + L+ YF+ +I + NP P+ + R+ K+ I+NFM G+V++
Sbjct: 7 GGKEFVTSKATLTKFDGYFKNLPEIQQVNPTS-PIFVDRSPKH--FETILNFMRDGDVDL 63
Query: 384 FQEQLESFLITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYEDIAPVQSDE 563
QE L L A + L + E+ A+ + S ++ DI
Sbjct: 64 PQEYLNQLLREARFYGLVKLVRDCEQAIARLDVGSGRP-----SERADPLSDIICNCRST 118
Query: 564 PINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISRPDDSINTKVKSVLPPSEXMQ 743
N+AP N + P N++S +A+Q+I + + + +++ + P + +
Sbjct: 119 SNNVAPAVVNSEIKPPN--KENDLSIASVPEYDANQNIVKNSEKMMLEIEKIPSPPKDAK 176
Query: 744 VD 749
++
Sbjct: 177 IE 178
>AC006648-11|AAF39860.2| 157|Caenorhabditis elegans Hypothetical
protein F59H6.12 protein.
Length = 157
Score = 35.1 bits (77), Expect = 0.054
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +3
Query: 174 RFENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIFKEN--PCQHPVIIFRNFKYEDLNA 347
R N+ D L K+ + LS SN+FR++F N + I ++ YED
Sbjct: 9 RAPNEGTDAILVIGDKKLHVSKAFLSFHSNFFRKLFSSNFKESEMTEIPIKDVTYEDFCL 68
Query: 348 IINFMYHGEVNIFQEQLESFLITAELLEVKGLTDNIEE 461
++ +Y + E E L A+ + +T+ +E+
Sbjct: 69 MLGTIYPRTIFPNDETSEKLLEMADRFLIPAVTNIVEQ 106
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.071
Identities = 27/130 (20%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Frame = +3
Query: 162 FNALRFENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIF-----KENPCQHPV-IIFRN 323
+ L + + D+ L G + + H++ L + +F +F + N + + I N
Sbjct: 60 YQKLFLQGENSDIVLAACGREWRVHKLYLKQ-TKFFESMFDGLWTESNSGRVQMEITDPN 118
Query: 324 FKYEDLNAIINFMYHGEVNIFQEQLESFLITAELLEVKGLTDNIEEDSAKSQIRLSENTS 503
+ LN+++ +YH E+ I +++E + A + + +TD E ++ LS +
Sbjct: 119 IDADGLNSVLGSLYHNEIEIDLDKIEGTVAAASYIVLDSVTDRCSEMMIEA---LSTKNA 175
Query: 504 LDLSSKSSKY 533
+ S+KY
Sbjct: 176 VRFYDVSTKY 185
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 195 DVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPVIIFRNFKYEDLNAIINFMYHGE 374
DV + AHR +L+A S YF IFK + + + +N+MY G
Sbjct: 43 DVEIVVQNKSFAAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGT 102
Query: 375 VNIFQEQLESFL 410
V I + + L
Sbjct: 103 VIIDRSSVSELL 114
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 195 DVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPVIIFRNFKYEDLNAIINFMYHGE 374
DV + AHR +L+A S YF IFK + + + +N+MY G
Sbjct: 43 DVEIVVQNKSFAAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGT 102
Query: 375 VNIFQEQLESFL 410
V I + + L
Sbjct: 103 VIIDRSSVSELL 114
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 195 DVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPVIIFRNFKYEDLNAIINFMYHGE 374
DV + AHR +L+A S YF IFK + + + +N+MY G
Sbjct: 43 DVEIVVQNKSFAAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGT 102
Query: 375 VNIFQEQLESFL 410
V I + + L
Sbjct: 103 VIIDRSSVSELL 114
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 33.1 bits (72), Expect = 0.22
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Frame = +3
Query: 390 EQLESFLITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLS-------SKSSKYEDIAP 548
EQLE LEVK L D E+ K I L + T + S +A
Sbjct: 1869 EQLEPVEPVEPKLEVKQLKDEATEEEEKRTIILPDETEKVIETIPAARPSAGPSEGTVAE 1928
Query: 549 VQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISRPDDSINTKVKSVLPP 728
V + E + P Q + + + +V PV+ E N IS D+ + K+ S +P
Sbjct: 1929 VSTSEILKARPAQESIERTVREV-PVDEYEETAN--------ISSGDELQDHKISSAVPD 1979
Query: 729 SE 734
SE
Sbjct: 1980 SE 1981
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 33.1 bits (72), Expect = 0.22
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Frame = +3
Query: 390 EQLESFLITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLS-------SKSSKYEDIAP 548
EQLE LEVK L D E+ K I L + T + S +A
Sbjct: 1869 EQLEPVEPVEPKLEVKQLKDEATEEEEKRTIILPDETEKVIETIPAARPSAGPSEGTVAE 1928
Query: 549 VQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISRPDDSINTKVKSVLPP 728
V + E + P Q + + + +V PV+ E N IS D+ + K+ S +P
Sbjct: 1929 VSTSEILKARPAQESIERTVREV-PVDEYEETAN--------ISSGDELQDHKISSAVPD 1979
Query: 729 SE 734
SE
Sbjct: 1980 SE 1981
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 33.1 bits (72), Expect = 0.22
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Frame = +3
Query: 390 EQLESFLITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLS-------SKSSKYEDIAP 548
EQLE LEVK L D E+ K I L + T + S +A
Sbjct: 1869 EQLEPVEPVEPKLEVKQLKDEATEEEEKRTIILPDETEKVIETIPAARPSAGPSEGTVAE 1928
Query: 549 VQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISRPDDSINTKVKSVLPP 728
V + E + P Q + + + +V PV+ E N IS D+ + K+ S +P
Sbjct: 1929 VSTSEILKARPAQESIERTVREV-PVDEYEETAN--------ISSGDELQDHKISSAVPD 1979
Query: 729 SE 734
SE
Sbjct: 1980 SE 1981
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/126 (19%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Frame = +3
Query: 381 IFQEQLESFLITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYEDIAP---V 551
I Q Q+ L EL E++ ++E + + L + S+ S S + DI V
Sbjct: 696 IAQLQVSDSLELEELEELRNKNLELQEQVKQLKEELEKEKSVAGSGNSGGWSDIDDNEVV 755
Query: 552 QSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISRPDDSINTKVKSVLPPS 731
++ +PI P+ S EN+ + ++E + ++ +++++ + N K+ ++
Sbjct: 756 EAVQPIETTPISSENSENLKKF--EAEIAELKASLEKTEKELTKYRNLYNEKLTAISDKE 813
Query: 732 EXMQVD 749
Q++
Sbjct: 814 NRSQIE 819
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/126 (19%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Frame = +3
Query: 381 IFQEQLESFLITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYEDIAP---V 551
I Q Q+ L EL E++ ++E + + L + S+ S S + DI V
Sbjct: 708 IAQLQVSDSLELEELEELRNKNLELQEQVKQLKEELEKEKSVAGSGNSGGWSDIDDNEVV 767
Query: 552 QSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISRPDDSINTKVKSVLPPS 731
++ +PI P+ S EN+ + ++E + ++ +++++ + N K+ ++
Sbjct: 768 EAVQPIETTPISSENSENLKKF--EAEIAELKASLEKTEKELTKYRNLYNEKLTAISDKE 825
Query: 732 EXMQVD 749
Q++
Sbjct: 826 NRSQIE 831
>AF025461-1|AAB70996.2| 297|Caenorhabditis elegans Hypothetical
protein M01D1.3 protein.
Length = 297
Score = 31.9 bits (69), Expect = 0.50
Identities = 21/109 (19%), Positives = 41/109 (37%)
Frame = +3
Query: 195 DVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPVIIFRNFKYEDLNAIINFMYHGE 374
D L K+ ++ LS S+YF +F E + I N YE+ +++ +Y
Sbjct: 141 DAVLLIGEKKLHVNKAFLSYHSDYFSDLFAEKVDEKNGIPIENVTYENFGLLMSVIYPEA 200
Query: 375 VNIFQEQLESFLITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLSSK 521
V + E L ++ + ++E + + L+ K
Sbjct: 201 VFSNHQNAEVLLELGNRFKIPAVMRHVENQIVGDTTKFPNKRLISLAEK 249
>Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical
protein F38H4.3 protein.
Length = 471
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +3
Query: 489 SENTSLDLSSKSSKYEDIAPVQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEAS 668
S++ S D S + + + P+N AP + + +++ V +++SE+ENG D
Sbjct: 371 SDSDSDDEGSGDAHLVAVNALVRMHPVNFAPHREDDRQSVSSVSTASDLSEKENGTDIGI 430
Query: 669 QDISRPDD 692
IS D
Sbjct: 431 TRISVKSD 438
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +3
Query: 387 QEQLESFLITAELLEVKGLTDNIEEDSAKSQIRLS-ENTSLDLSSKSSKYEDIAPVQSDE 563
Q +SF + E+K D +E + S S E TSL++ K + + E
Sbjct: 11011 QSGSDSFTLQDLYEELKAKEDAVEAGAETSNADQSAEKTSLEVRDMKKKMKKKQVSGTAE 11070
Query: 564 PINLAPVQSNRDENIPQVCPVNNVSEQENGNDEAS 668
NL +SNRDE ++ +N + G DE+S
Sbjct: 11071 --NLIG-ESNRDETSMEIRDLNTQHSNQTGEDESS 11102
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +3
Query: 387 QEQLESFLITAELLEVKGLTDNIEEDSAKSQIRLS-ENTSLDLSSKSSKYEDIAPVQSDE 563
Q +SF + E+K D +E + S S E TSL++ K + + E
Sbjct: 11011 QSGSDSFTLQDLYEELKAKEDAVEAGAETSNADQSAEKTSLEVRDMKKKMKKKQVSGTAE 11070
Query: 564 PINLAPVQSNRDENIPQVCPVNNVSEQENGNDEAS 668
NL +SNRDE ++ +N + G DE+S
Sbjct: 11071 --NLIG-ESNRDETSMEIRDLNTQHSNQTGEDESS 11102
>Z81070-3|CAB02998.1| 408|Caenorhabditis elegans Hypothetical
protein F26E4.4 protein.
Length = 408
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/93 (23%), Positives = 40/93 (43%)
Frame = +3
Query: 450 NIEEDSAKSQIRLSENTSLDLSSKSSKYEDIAPVQSDEPINLAPVQSNRDENIPQVCPVN 629
++EED A + NT S+ + E + + +L +Q +P V +
Sbjct: 177 SLEEDEAPIDEKKPLNTESGPKSRKATPEQLINMLEASSSDLLHLQ------LPSV--IG 228
Query: 630 NVSEQENGNDEASQDISRPDDSINTKVKSVLPP 728
++ N EAS ++ PD+ + T + S PP
Sbjct: 229 SICNNIEANVEASMEVDEPDNDVPTGIVSAPPP 261
>U41543-11|AAP40530.1| 362|Caenorhabditis elegans Hypothetical
protein F46H5.2b protein.
Length = 362
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +3
Query: 477 QIRLSENTSLDLSSKSSKYEDIAPVQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGN 656
Q+ S +TS + SS S + P+++ P++ V +++EN P V + E+ N
Sbjct: 268 QLFESASTSSEFSSFSVPHSP-GPLRAMTPLSSVSV-GDQEENSPSV---KDAEEKTTDN 322
Query: 657 DEASQDISRPDD 692
DE QD+ D+
Sbjct: 323 DEEMQDVEMSDN 334
>U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical
protein F46H5.2a protein.
Length = 453
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +3
Query: 477 QIRLSENTSLDLSSKSSKYEDIAPVQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGN 656
Q+ S +TS + SS S + P+++ P++ V +++EN P V + E+ N
Sbjct: 359 QLFESASTSSEFSSFSVPHSP-GPLRAMTPLSSVSV-GDQEENSPSV---KDAEEKTTDN 413
Query: 657 DEASQDISRPDD 692
DE QD+ D+
Sbjct: 414 DEEMQDVEMSDN 425
>Z78019-1|CAB01456.1| 662|Caenorhabditis elegans Hypothetical
protein ZK863.4 protein.
Length = 662
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +3
Query: 291 PCQHPVIIFRNFKYEDLNAIINFMYHGEVNIFQEQL 398
P + P+I+F+N + E +N + H ++++ + L
Sbjct: 257 PARTPIIVFKNIEVEGMNVSYDLSVHNQISVEKASL 292
>U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical
protein ZC204.3 protein.
Length = 261
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 180 ENDLVDVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPVIIFRNFKYEDLNAIINF 359
E++ D L + ++ ++ LS S YF ++FK++ I + YED +++
Sbjct: 106 ESEDTDAVLVVEDKRLHVNKEFLSLHSTYFAELFKKSE-----ITIEDLSYEDFGLLMSN 160
Query: 360 MY 365
+Y
Sbjct: 161 IY 162
>U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical
protein T21D11.1 protein.
Length = 279
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 534 EDIAPVQSDEPINLAPVQSNRDENIPQ-VCPVNNVSEQENGNDEASQDISRPDDSINTKV 710
+D+ ++S PIN S +EN V V +S++E G DE + D P D+ +T
Sbjct: 196 DDVRAIRSLFPINETDANSGSEENSEDPVTTVKPISKEE-GIDEENND---PFDASSTTT 251
Query: 711 KSVLPPS 731
S P S
Sbjct: 252 SSSSPDS 258
>AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like protein
protein.
Length = 279
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 534 EDIAPVQSDEPINLAPVQSNRDENIPQ-VCPVNNVSEQENGNDEASQDISRPDDSINTKV 710
+D+ ++S PIN S +EN V V +S++E G DE + D P D+ +T
Sbjct: 196 DDVRAIRSLFPINETDANSGSEENSEDPVTTVKPISKEE-GIDEENND---PFDASSTTT 251
Query: 711 KSVLPPS 731
S P S
Sbjct: 252 SSSSPDS 258
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical protein
F09E8.3 protein.
Length = 1369
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 534 EDIAPVQSDEPINLAPVQSNRDENIPQVCP--VNNVSEQ-ENGNDEASQDISRPDDSINT 704
ED+ V +DE +A V+S C + NVSE+ E EAS S+ +I
Sbjct: 849 EDMDVVLADEDGFMAAVESFVKRKKTSFCESSMRNVSEEIEKERSEASTPASKSRSTITA 908
Query: 705 KVKSVLPPSEXMQVD 749
+ SVL VD
Sbjct: 909 RSNSVLSSRSMASVD 923
>Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical
protein B0464.5a protein.
Length = 1003
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +3
Query: 462 DSAKSQIRLSENTSLDLSSKSSKY--EDIAPVQSDEPINLAPVQSNRDENIPQVCPVNNV 635
DS+ S S +T D ++ Y EDI + + A ++ P + P NN
Sbjct: 287 DSSVSSSTSSSSTGDDGDDSATSYDSEDIEIQMFEYDLGTACASASISIPRPSIIPRNNK 346
Query: 636 SEQENGNDEASQDIS 680
+ N N+E D+S
Sbjct: 347 KTEVNANEERLDDLS 361
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 534 EDIAPVQSDEPINLAPVQSNRDENIPQVCP--VNNVSEQ-ENGNDEASQDISRPDDSINT 704
ED+ V +DE +A V+S C + NVSE+ E EAS S+ +I
Sbjct: 849 EDMDVVLADEDGFMAAVESFVKRKKTSFCESSMRNVSEEIEKERSEASTPASKSRSTITA 908
Query: 705 KVKSVLPPSEXMQVD 749
+ SVL VD
Sbjct: 909 RSNSVLSSRSMASVD 923
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 534 EDIAPVQSDEPINLAPVQSNRDENIPQVCP--VNNVSEQ-ENGNDEASQDISRPDDSINT 704
ED+ V +DE +A V+S C + NVSE+ E EAS S+ +I
Sbjct: 849 EDMDVVLADEDGFMAAVESFVKRKKTSFCESSMRNVSEEIEKERSEASTPASKSRSTITA 908
Query: 705 KVKSVLPPSEXMQVD 749
+ SVL VD
Sbjct: 909 RSNSVLSSRSMASVD 923
>AF040660-4|AAC71145.1| 323|Caenorhabditis elegans Hypothetical
protein W05G11.5 protein.
Length = 323
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 246 LSACSNYFRQIFKEN--PCQHPVIIFRNFKYEDLNAIINFMYHGEVNIFQEQLESFLITA 419
LS S+YFR++F N Q I R+ YED +++ +Y + E + L A
Sbjct: 137 LSFHSSYFRKLFSSNFKEAQLTEIPIRDVSYEDFCLLLSTIYPNMIFPNDETADKLLELA 196
Query: 420 ELLEVKGLTDNI 455
+ + +T+ +
Sbjct: 197 DRFLMPAVTNMV 208
>Z73103-7|CAA97428.1| 416|Caenorhabditis elegans Hypothetical
protein C08F8.8 protein.
Length = 416
Score = 27.9 bits (59), Expect = 8.2
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Frame = +3
Query: 402 SFLITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYEDIAPVQ-------SD 560
+FL+ E E + D EED A S + EN+S D S ++ PVQ S
Sbjct: 324 NFLLKQEKTETEEGEDIEEEDDATSSNQFDENSSTDDRSVG----ELDPVQLFLALNSST 379
Query: 561 EPINLAPVQSNRD-ENIPQVCPVNNVSEQENGNDE 662
+P + + S+R +I + + ++ E+E+ N E
Sbjct: 380 QPSSASSPSSSRPRHSIRSITELLSIQEEESVNVE 414
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 534 EDIAPVQSDEPINLAPVQSNRDEN--IPQVCPVNNVSE 641
E I D + +PVQSNRDE +P + P +E
Sbjct: 4299 ESITSENMDRETSSSPVQSNRDEEFVLPAIAPYKQPTE 4336
>U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform b protein.
Length = 392
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 510 LSSKSSKYEDIAPVQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISR 683
L S SSK +D+ SDE N+A + E + N+ + +A +D+ +
Sbjct: 43 LPSSSSKDDDLLSTSSDEVENMATRTLQQLEESTSIISANSDDDSVKKEKQAEKDVEK 100
>U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform a protein.
Length = 481
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 510 LSSKSSKYEDIAPVQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISR 683
L S SSK +D+ SDE N+A + E + N+ + +A +D+ +
Sbjct: 43 LPSSSSKDDDLLSTSSDEVENMATRTLQQLEESTSIISANSDDDSVKKEKQAEKDVEK 100
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 534 EDIAPVQSDEPINLAPVQSNRDEN--IPQVCPVNNVSE 641
E I D + +PVQSNRDE +P + P +E
Sbjct: 4299 ESITSENMDRETSSSPVQSNRDEEFVLPAIAPYKQPTE 4336
>U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 510 LSSKSSKYEDIAPVQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISR 683
L S SSK +D+ SDE N+A + E + N+ + +A +D+ +
Sbjct: 43 LPSSSSKDDDLLSTSSDEVENMATRTLQQLEESTSIISANSDDDSVKKEKQAEKDVEK 100
>U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 510 LSSKSSKYEDIAPVQSDEPINLAPVQSNRDENIPQVCPVNNVSEQENGNDEASQDISR 683
L S SSK +D+ SDE N+A + E + N+ + +A +D+ +
Sbjct: 43 LPSSSSKDDDLLSTSSDEVENMATRTLQQLEESTSIISANSDDDSVKKEKQAEKDVEK 100
>AY204176-1|AAO39180.1| 409|Caenorhabditis elegans nuclear receptor
NHR-67 protein.
Length = 409
Score = 27.9 bits (59), Expect = 8.2
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Frame = +3
Query: 402 SFLITAELLEVKGLTDNIEEDSAKSQIRLSENTSLDLSSKSSKYEDIAPVQ-------SD 560
+FL+ E E + D EED A S + EN+S D S ++ PVQ S
Sbjct: 317 NFLLKQEKTETEEGEDIEEEDDATSSNQFDENSSTDDRSVG----ELDPVQLFLALNSST 372
Query: 561 EPINLAPVQSNRD-ENIPQVCPVNNVSEQENGNDE 662
+P + + S+R +I + + ++ E+E+ N E
Sbjct: 373 QPSSASSPSSSRPRHSIRSITELLSIQEEESVNVE 407
>AF025465-4|AAB71029.1| 297|Caenorhabditis elegans Hypothetical
protein K02E7.9 protein.
Length = 297
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 195 DVTLCCDGGKIKAHRMLLSACSNYFRQIFKENPCQHPVIIFRNFKYEDLNAIINFMY 365
D L K+ ++ LS S+YF +F E + I N YE+ +++ +Y
Sbjct: 142 DAVLLIGEKKLHVNKAFLSYHSDYFCDLFAEKFDEKNGIPIENVTYENFGLLMSIIY 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,356,182
Number of Sequences: 27780
Number of extensions: 323884
Number of successful extensions: 1069
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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