Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H05
         (495 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    24   0.87 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   2.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   2.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   2.6  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.1  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 194 ILARCYTSSLASVSTVFRSF 135
           ILA+C TSSL+S+ T    +
Sbjct: 231 ILAKCITSSLSSLYTCIAGY 250


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 4   YLHVLTFKSXNCA 42
           YLH++T  + NCA
Sbjct: 162 YLHIITMINMNCA 174


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 4   YLHVLTFKSXNCA 42
           YLH++T  + NCA
Sbjct: 162 YLHIITMINMNCA 174


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 4   YLHVLTFKSXNCA 42
           YLH++T  + NCA
Sbjct: 162 YLHIITMINMNCA 174


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 173 WYNTEPGSYLRNDRILHRERY 235
           WYN     YL+N  + H+ ++
Sbjct: 37  WYNPYYYQYLQNAALYHKLQF 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,068
Number of Sequences: 336
Number of extensions: 1723
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)