Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H05
         (495 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003132-2|AAB54134.2|  568|Caenorhabditis elegans Hypothetical ...    27   7.5  
Z69793-2|CAA93671.1|  136|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>AF003132-2|AAB54134.2|  568|Caenorhabditis elegans Hypothetical
           protein F37E3.2 protein.
          Length = 568

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 171 FPRVSQYSI*ILLQFRNVTFHGAYSNI*NV 82
           FPR++ + + +LLQ     FHG+  N+ N+
Sbjct: 122 FPRLASFQV-VLLQRTKANFHGSLRNLKNL 150


>Z69793-2|CAA93671.1|  136|Caenorhabditis elegans Hypothetical
           protein R03A10.2 protein.
          Length = 136

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 377 VCVCVFLFNIFV 412
           +CVCVF FN F+
Sbjct: 63  ICVCVFFFNFFI 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,850,458
Number of Sequences: 27780
Number of extensions: 145521
Number of successful extensions: 376
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)