Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_H04
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 555 VIQSVHVDRIAEYVRCYVTIAYRRHESIVGWQPE 454
           ++++V+  R  + V CYV  A R  +  + + PE
Sbjct: 164 IVETVYDPREDDRVVCYVQAAARYRKEPLAFSPE 197


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +3

Query: 483 GVYRQWSRSSERIQRYGLH 539
           G+Y  WS+ S++++ + +H
Sbjct: 148 GLYSTWSKKSKQVEYFLIH 166


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +3

Query: 483 GVYRQWSRSSERIQRYGLH 539
           G+Y  WS+ S++++ + +H
Sbjct: 148 GLYSTWSKKSKQVEYFLIH 166


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = +1

Query: 424 INN--DPKVFSTFRLPTN 471
           +NN  D K +ST++ PTN
Sbjct: 412 LNNLLDKKPYSTYKFPTN 429


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = +1

Query: 424 INN--DPKVFSTFRLPTN 471
           +NN  D K +ST++ PTN
Sbjct: 304 LNNLLDKKPYSTYKFPTN 321


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 207 FYLFCSIYDKYLEFQYLLCLY 269
           +Y +C+     +   +LLC+Y
Sbjct: 147 YYFYCAFIIFTVHLLFLLCIY 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,283
Number of Sequences: 336
Number of extensions: 2792
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)