Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_G16
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   3.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   5.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   7.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    19   9.5  

>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 25  RVGKLLPKALKFSPQRXQPMK 87
           R  ++ P  LKF P R  P K
Sbjct: 95  RNAEIYPDLLKFDPDRFLPDK 115


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 164 NNVFLFLNKY 193
           NN +L LNKY
Sbjct: 26  NNTYLVLNKY 35


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 131 NYLRNNINLQINNVFLFL 184
           NY  +NI L + N F  L
Sbjct: 102 NYKDSNIGLVVANAFFLL 119


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 140 RNNINLQINNVFLFLN 187
           +NNI L +  VF+  N
Sbjct: 347 KNNIKLYVRRVFIMDN 362


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,336
Number of Sequences: 336
Number of extensions: 657
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)