Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_G14
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   4.8  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 278 STVTQCCRPLNFRSMLVQQRLCFLP 204
           ST    CR   FR+   +  +CF P
Sbjct: 383 STTANSCRSSTFRNNRDEYNVCFRP 407


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 425 LLHRIDKFIKNLNA 384
           L HR+ K IK LNA
Sbjct: 218 LHHRLSKLIKQLNA 231


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -3

Query: 155 TDPQCHILQHRRPRLPLMQXEAPCXFNFCALRARRR 48
           T P   ++Q +RP  P  +  +    N   LR +R+
Sbjct: 37  TQPTKTVIQSKRPLAPAPERTSVLVTNNSDLRCKRK 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,722
Number of Sequences: 336
Number of extensions: 1769
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)