Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_G11
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 37 2e-04
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 36 3e-04
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 36 3e-04
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 33 0.002
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 27 0.24
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 27 0.24
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 25 0.56
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 1.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.7
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 5.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 5.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.3
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 21 9.2
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 9.2
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.2
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 9.2
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 37.1 bits (82), Expect = 2e-04
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +1
Query: 421 SDGLNIHIPKVSKSMSGAYKCITNFEGQQYVQTHTIEAYDPLYFINAAEVQHIMESQDSR 600
+DG ++++ KV +G Y C Q VQTH + + Q +++
Sbjct: 363 NDG-SLYLTKVQLIHAGNYTCHA-VRNQDVVQTHVLTIHTIPEVKVTPRFQAKRLKEEAN 420
Query: 601 INCEARGEYPPLITWHKGEENALXEIQNSEKYSITKEG--LIXRNV 732
I C GE P + W K +E AL Q +KY + G LI +NV
Sbjct: 421 IRCHVAGEPLPRVQWLKNDE-ALNHDQ-PDKYDLIGNGTKLIIKNV 464
Score = 23.4 bits (48), Expect = 2.3
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 565 EVQHIME--SQDSRINCEARGEYPPLITWHKGEENALXEIQNSEKYSITKEG 714
EV HI + I C+ G PP + W + A E N + + +G
Sbjct: 316 EVNHISARVGDNVEIKCDVTGTPPPPLVWRR--NGADLETLNEPEIRVFNDG 365
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 36.3 bits (80), Expect = 3e-04
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 4/141 (2%)
Frame = +1
Query: 310 HCSEPGYNMQYLKWTDINNEIITAGPGTDSLIYVEKQSDGLNIHIPKVSKSMSGAYKC-I 486
HC G + W Y + S+G + + V + G Y C
Sbjct: 730 HCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNG-TLLLQHVKEDREGFYLCQA 788
Query: 487 TNFEGQQYVQTHTIEAYDPLYFINAAEVQHIMESQDSRINCEARGEYPPLITWHKG---E 657
+N G + ++ YF + + + + + ++CE G+ P +TW KG E
Sbjct: 789 SNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVTWLKGGKIE 848
Query: 658 ENALXEIQNSEKYSITKEGLI 720
N + + K +T +G+I
Sbjct: 849 LNPSTNYRVTVKREVTPDGVI 869
Score = 30.7 bits (66), Expect = 0.015
Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +1
Query: 436 IHIPKVSKSMSGAYKCITNFEGQQYVQTHTIEA-YDPLYFINAAEVQHIMESQDSRINCE 612
+ I ++ SG Y C+ + T ++ P + + +V + ++ ++C+
Sbjct: 674 LSITNLAAEHSGDYTCVAANPAAEVRYTAKLQVKVPPRWIVEPTDVS-VERNKHVALHCQ 732
Query: 613 ARGEYPPLITWHKGEENALXEIQNSEKYSITK 708
A+G P I W K + E + + + TK
Sbjct: 733 AQGVPTPTIVWKKATGSKSGEYEELRERAYTK 764
Score = 25.0 bits (52), Expect = 0.75
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 2/115 (1%)
Frame = +1
Query: 313 CSEPGYNMQYLKWTDINNEIITAGPGTDSLIYVEKQSDGLNIHIPKVSKSMSGAYKC-IT 489
C GY ++ +KW N E+ D L + DG + K +G Y C
Sbjct: 540 CPVAGYPIEEIKWERANREL------PDDL-RQKVLPDGTLVITSVQKKGDAGVYTCSAR 592
Query: 490 NFEGQQYVQTHTIEAYDPLYFINAAEVQHIMESQDSRINCEARGEYPPL-ITWHK 651
N +G ++ + P + + E +R C PPL I+W K
Sbjct: 593 NKQGHSARRSGDVAVIVPPIIEPFTFQEGLSEGMRTRTVCGVAAGDPPLTISWLK 647
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 36.3 bits (80), Expect = 3e-04
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 4/141 (2%)
Frame = +1
Query: 310 HCSEPGYNMQYLKWTDINNEIITAGPGTDSLIYVEKQSDGLNIHIPKVSKSMSGAYKC-I 486
HC G + W Y + S+G + + V + G Y C
Sbjct: 726 HCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNG-TLLLQHVKEDREGFYLCQA 784
Query: 487 TNFEGQQYVQTHTIEAYDPLYFINAAEVQHIMESQDSRINCEARGEYPPLITWHKG---E 657
+N G + ++ YF + + + + + ++CE G+ P +TW KG E
Sbjct: 785 SNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVTWLKGGKIE 844
Query: 658 ENALXEIQNSEKYSITKEGLI 720
N + + K +T +G+I
Sbjct: 845 LNPSTNYRVTVKREVTPDGVI 865
Score = 31.5 bits (68), Expect = 0.009
Identities = 18/89 (20%), Positives = 36/89 (40%)
Frame = +1
Query: 442 IPKVSKSMSGAYKCITNFEGQQYVQTHTIEAYDPLYFINAAEVQHIMESQDSRINCEARG 621
I +S +G Y C+ + T + + P +I + ++ ++C+A+G
Sbjct: 672 IEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPPRWIVEPTDVSVERNKHVALHCQAQG 731
Query: 622 EYPPLITWHKGEENALXEIQNSEKYSITK 708
P I W K + E + + + TK
Sbjct: 732 VPTPTIVWKKATGSKSGEYEELRERAYTK 760
Score = 24.2 bits (50), Expect = 1.3
Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 2/115 (1%)
Frame = +1
Query: 313 CSEPGYNMQYLKWTDINNEIITAGPGTDSLIYVEKQSDGLNIHIPKVSKSMSGAYKC-IT 489
C GY ++ +KW N E+ D L + DG + K +G Y C
Sbjct: 540 CPVAGYPIEEIKWERANREL------PDDL-RQKVLPDGTLVITSVQKKGDAGVYTCSAR 592
Query: 490 NFEGQQYVQTHTIEAYDPLYFINAAEVQHIMESQDSRINCE-ARGEYPPLITWHK 651
N +G ++ + P + + + + + C RG+ P I+W K
Sbjct: 593 NKQGHSARRSGDVAVIVPPKISPFTADRDLHLGERTTLTCSVTRGDLPLSISWLK 647
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 33.5 bits (73), Expect = 0.002
Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 6/150 (4%)
Frame = +1
Query: 280 PTGSSFYQ----ECHCSEPGYNMQYLKWTDINNEIITAGPGTD-SLIYVEKQSDGLNIHI 444
PT +F Q C G+ + W + T G TD L + + + I
Sbjct: 685 PTDKAFAQGSDARVECKADGFPKPQVTWKKAAGD--TPGDYTDLKLSNPDISVEDGTLSI 742
Query: 445 PKVSKSMSGAYKC-ITNFEGQQYVQTHTIEAYDPLYFINAAEVQHIMESQDSRINCEARG 621
+ K+ G Y C N G I P +F + Q + + + CEA+G
Sbjct: 743 NNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQCEAQG 802
Query: 622 EYPPLITWHKGEENALXEIQNSEKYSITKE 711
E P I W+ N + ++ +Y+I +E
Sbjct: 803 EKPIGILWNM--NNKRLDPKSDSRYTIREE 830
Score = 31.5 bits (68), Expect = 0.009
Identities = 25/127 (19%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Frame = +1
Query: 277 IPTGSSFYQECHCSEPGYNMQY-LKWTDINNEIITAGPGTDSLIYVEKQSDGLN-IHIPK 450
+P + + C P ++ ++W+ E+ G S + +K +D ++ + I
Sbjct: 593 LPMNAGEFANLQCIVPTGDLPLNIRWSYPGEEM-----GGSSGVLAKKVADRVSMLMISV 647
Query: 451 VSKSMSGAYKCITNFEGQQYVQTHTIEAYDPLYFINAAEVQHIMESQDSRINCEARGEYP 630
++ +G Y C + T+ P +I + + D+R+ C+A G
Sbjct: 648 ITARHAGEYVCTAENAAGTASHSTTLTVNVPPRWILEPTDKAFAQGSDARVECKADGFPK 707
Query: 631 PLITWHK 651
P +TW K
Sbjct: 708 PQVTWKK 714
Score = 24.6 bits (51), Expect = 0.99
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 601 INCEARGEYPPLITWHKGEENALXEI 678
+ C+ARG P I W + + +A+ ++
Sbjct: 23 VECQARGNPQPDIIWVRADGSAVGDV 48
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.24
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 210 NDH*YNNTRHRTKHCKETKTQYFNI 136
N++ YNN ++ +C K Y+NI
Sbjct: 87 NNYNYNNNNYKKLYCNNYKKLYYNI 111
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.6 bits (56), Expect = 0.24
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 210 NDH*YNNTRHRTKHCKETKTQYFNI 136
N++ YNN ++ +C K Y+NI
Sbjct: 87 NNYNYNNNNYKKLYCNNYKKLYYNI 111
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.56
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 210 NDH*YNNTRHRTKHCKETKTQYFNI 136
N++ YNN ++ +C + Y+NI
Sbjct: 87 NNYNYNNNNYKKLYCNNYRKLYYNI 111
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.4 bits (43), Expect(2) = 1.3
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 588 RFHNMLNFCSINKVQWII 535
+ HN + CS+N V I
Sbjct: 127 KHHNFIKVCSVNDVNMTI 144
Score = 21.0 bits (42), Expect(2) = 1.3
Identities = 4/8 (50%), Positives = 8/8 (100%)
Frame = -1
Query: 543 WIICFYCM 520
WI+C++C+
Sbjct: 184 WILCYFCI 191
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -1
Query: 210 NDH*YNNTRHRTKHCKETKTQYFNIGNRNKQP 115
N++ YNN + + K Y+NI N + P
Sbjct: 334 NNNNYNNNNYNNNYNNNCKKLYYNIINIEQIP 365
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 349 WTDINNEIITAGPGTDSLIYVEKQSDGLNIHIPKVS 456
W D + G +L+ + Q+ G+N +P VS
Sbjct: 264 WLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVS 299
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 349 WTDINNEIITAGPGTDSLIYVEKQSDGLNIHIPKVS 456
W D + G +L+ + Q+ G+N +P VS
Sbjct: 264 WLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVS 299
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 216 HGNDH*YNNTRHRTKHCKETKTQYFNIGNRNKQP 115
H N++ YN + + K Y+NI N + P
Sbjct: 90 HNNNYKYNYNNNNYNNNNYNKKLYYNIINIEQIP 123
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 216 HGNDH*YNNTRHRTKHCKETKTQYFNIGNRNKQP 115
H N++ YN + + K Y+NI N + P
Sbjct: 90 HNNNYKYNYNNNNYNNNNYNKKLYYNIINIEQIP 123
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/34 (26%), Positives = 13/34 (38%)
Frame = -1
Query: 231 FRPDKHGNDH*YNNTRHRTKHCKETKTQYFNIGN 130
F D H H +T + HC Q+ + N
Sbjct: 19 FTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVAN 52
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -1
Query: 237 TVFRPDKHGNDH*YNNTRHRTKHCKETKTQYFNI 136
T+ + + N++ YNN + + K Y+NI
Sbjct: 89 TIHNNNNYNNNN-YNNYNYNNNNYNNYKKLYYNI 121
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 11 RARIARANEKKNCFDCR 61
RAR ARAN K N D +
Sbjct: 373 RARKARANRKPNLGDIK 389
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 9.2
Identities = 5/10 (50%), Positives = 9/10 (90%)
Frame = -1
Query: 549 VQWIICFYCM 520
V WI+C++C+
Sbjct: 215 VVWIMCYFCI 224
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 9.2
Identities = 5/10 (50%), Positives = 9/10 (90%)
Frame = -1
Query: 549 VQWIICFYCM 520
V WI+C++C+
Sbjct: 268 VVWIMCYFCI 277
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +2
Query: 551 LLMLQKFSILWNRKIHESIVKHA 619
++ +K+S + N + H S +KH+
Sbjct: 95 IIQTEKYSNMLNSEKHASFLKHS 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,093
Number of Sequences: 438
Number of extensions: 4302
Number of successful extensions: 32
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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