Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_G09
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97403-5|AAO21397.1| 268|Caenorhabditis elegans Hypothetical pr... 268 2e-72
U97403-4|AAB52474.2| 445|Caenorhabditis elegans Hypothetical pr... 268 2e-72
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 31 0.73
U23510-10|AAC46780.1| 979|Caenorhabditis elegans Hypothetical p... 31 0.97
Z72503-8|CAJ85752.1| 341|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF117337-1|AAD22029.1| 277|Caenorhabditis elegans Hus1-like pro... 28 5.2
AF106587-2|AAC78225.1| 277|Caenorhabditis elegans Human hus1 re... 28 5.2
AC006641-12|AAF39810.1| 501|Caenorhabditis elegans Hypothetical... 28 5.2
AC006641-10|AAF39811.1| 501|Caenorhabditis elegans Hypothetical... 28 5.2
AC006641-8|AAF39822.1| 508|Caenorhabditis elegans Hypothetical ... 28 5.2
Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical p... 27 9.1
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 27 9.1
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 27 9.1
>U97403-5|AAO21397.1| 268|Caenorhabditis elegans Hypothetical
protein T10E9.7b protein.
Length = 268
Score = 268 bits (657), Expect = 2e-72
Identities = 116/172 (67%), Positives = 145/172 (84%)
Frame = +2
Query: 149 RPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDH 328
+PT+ K+D ++ +L +FGKY A+CLPK+VQKVQ AG+ELE+LI P V+PVLSFLK +
Sbjct: 41 KPTIWKIDEHKRERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVVPVLSFLKGN 100
Query: 329 HSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAA 508
HSAQF NL I GMDVP+R NR E+IY++ S+R+NAR+RV+TYTDE+ P+DSA VFK A
Sbjct: 101 HSAQFTNLTFITGMDVPTRKNRLEVIYSLYSVRFNARVRVRTYTDEIAPIDSATPVFKGA 160
Query: 509 NWYEREIWDMYGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVXVRYDDE 664
+W+ERE++DMYGV+F NHPDLRRILTDYGFEGHPFRKD+PLSGY VRYD E
Sbjct: 161 DWFEREVYDMYGVWFNNHPDLRRILTDYGFEGHPFRKDYPLSGYNEVRYDPE 212
>U97403-4|AAB52474.2| 445|Caenorhabditis elegans Hypothetical
protein T10E9.7a protein.
Length = 445
Score = 268 bits (657), Expect = 2e-72
Identities = 116/172 (67%), Positives = 145/172 (84%)
Frame = +2
Query: 149 RPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDH 328
+PT+ K+D ++ +L +FGKY A+CLPK+VQKVQ AG+ELE+LI P V+PVLSFLK +
Sbjct: 218 KPTIWKIDEHKRERLANFGKYAAECLPKFVQKVQFAAGDELELLIHPSGVVPVLSFLKGN 277
Query: 329 HSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAA 508
HSAQF NL I GMDVP+R NR E+IY++ S+R+NAR+RV+TYTDE+ P+DSA VFK A
Sbjct: 278 HSAQFTNLTFITGMDVPTRKNRLEVIYSLYSVRFNARVRVRTYTDEIAPIDSATPVFKGA 337
Query: 509 NWYEREIWDMYGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVXVRYDDE 664
+W+ERE++DMYGV+F NHPDLRRILTDYGFEGHPFRKD+PLSGY VRYD E
Sbjct: 338 DWFEREVYDMYGVWFNNHPDLRRILTDYGFEGHPFRKDYPLSGYNEVRYDPE 389
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 31.1 bits (67), Expect = 0.73
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = +2
Query: 188 QLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQFANLVDIAG 367
+ +DFG + C+ + + + + + E ++P + + + S L D H + N
Sbjct: 508 EFIDFGLDLQACIELIEKPLGIVSMLDEECIVPKASDLTLASKLNDQHLGKHPNFQKPRP 567
Query: 368 MDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKA--ANWYEREIWDMY 541
I++ ++RYN + ++ D L D+A V KA N ++W Y
Sbjct: 568 PKGKQAEAHLAIVHYAGTVRYNVKGWLEKNKDPLN--DTAVTVLKANKGNQLMADLWADY 625
>U23510-10|AAC46780.1| 979|Caenorhabditis elegans Hypothetical
protein R12C12.1a protein.
Length = 979
Score = 30.7 bits (66), Expect = 0.97
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 588 SVKILLKSGWLAKNTPYMSQISRSYQFAALN--TSQAESTGV 469
S IL GW+++ TPY ++IS+ + LN T AE TG+
Sbjct: 115 SRNILQNIGWISQYTPYQAEISQGRLESLLNFQTMIAEMTGL 156
>Z72503-8|CAJ85752.1| 341|Caenorhabditis elegans Hypothetical
protein C26C6.4b protein.
Length = 341
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -3
Query: 529 DLSFVPICGLEYIAG*VYRSQLVSVSFDSYSGIVT*RKY 413
D+ IC LE+I G + S+LV++SFD+ S ++ KY
Sbjct: 46 DIFLNHICNLEFIPGAL--SRLVAISFDTPSHLILKEKY 82
>Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical
protein C26C6.4a protein.
Length = 424
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -3
Query: 529 DLSFVPICGLEYIAG*VYRSQLVSVSFDSYSGIVT*RKY 413
D+ IC LE+I G + S+LV++SFD+ S ++ KY
Sbjct: 129 DIFLNHICNLEFIPGAL--SRLVAISFDTPSHLILKEKY 165
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 28.3 bits (60), Expect = 5.2
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = +2
Query: 290 DAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIR--VKTYTD 463
D IP+ + L H F + M++P R EI+ + +RY + R K D
Sbjct: 19 DCRIPLHNELAYQHGIHFEAKY-VGSMEIPRPGTRIEIVAAMRRVRYEFKARGIKKRPVD 77
Query: 464 ELTPVDSACDVFKAANWYEREI-WDMYGVFFANHPDLR 574
VD V + E+ + WD + HP R
Sbjct: 78 ITVSVDGVKVVLQRKKQKEKGLSWDESKLLVMFHPIYR 115
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 28.3 bits (60), Expect = 5.2
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = +2
Query: 290 DAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIR--VKTYTD 463
D IP+ + L H F + M++P R EI+ + +RY + R K D
Sbjct: 19 DCRIPLHNELAYQHGIHFEAKY-VGSMEIPRPGTRIEIVAAMRRVRYEFKARGIKKRPVD 77
Query: 464 ELTPVDSACDVFKAANWYEREI-WDMYGVFFANHPDLR 574
VD V + E+ + WD + HP R
Sbjct: 78 ITVSVDGVKVVLQRKKQKEKGLSWDESKLLVMFHPIYR 115
>AF117337-1|AAD22029.1| 277|Caenorhabditis elegans Hus1-like
protein protein.
Length = 277
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 561 WLAKNTPYMSQISRSYQFAALNTSQAESTGVNSSV*VLTLIRAL 430
W + + PY SQI R + +N E + + + +L+R L
Sbjct: 54 WFSLSIPYSSQIFRKFDMVGMNPRNEEQNLIYFELEIDSLVRVL 97
>AF106587-2|AAC78225.1| 277|Caenorhabditis elegans Human hus1
related protein 1 protein.
Length = 277
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 561 WLAKNTPYMSQISRSYQFAALNTSQAESTGVNSSV*VLTLIRAL 430
W + + PY SQI R + +N E + + + +L+R L
Sbjct: 54 WFSLSIPYSSQIFRKFDMVGMNPRNEEQNLIYFELEIDSLVRVL 97
>AC006641-12|AAF39810.1| 501|Caenorhabditis elegans Hypothetical
protein F45D11.16 protein.
Length = 501
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 131 PPXQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQ 241
P + R TV + + K LVD GK V + PKY+Q
Sbjct: 92 PQGVDARTTVKNVATITK-DLVDIGKIVFEKFPKYLQ 127
>AC006641-10|AAF39811.1| 501|Caenorhabditis elegans Hypothetical
protein F45D11.15 protein.
Length = 501
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 131 PPXQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQ 241
P + R TV + + K LVD GK V + PKY+Q
Sbjct: 92 PQGVDARTTVKNVATITK-DLVDIGKIVFEKFPKYLQ 127
>AC006641-8|AAF39822.1| 508|Caenorhabditis elegans Hypothetical
protein F45D11.14 protein.
Length = 508
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 131 PPXQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQ 241
P + R TV + + K LVD GK V + PKY+Q
Sbjct: 99 PQGVDARTTVKNVATITK-DLVDIGKIVFEKFPKYLQ 134
>Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical
protein F36G9.12 protein.
Length = 707
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +2
Query: 155 TVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSFLK 322
T A+L K Q V F K + DC+ +++ + + +G+ + ++ PD ++PV +F K
Sbjct: 254 TNAELILSVKEQKVGFIKCL-DCI-RFLSMLWVVSGHTVSNIMFPDVLLPVTTFTK 307
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (werner's
syndrome) relatedprotein 1 protein.
Length = 1056
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +2
Query: 149 RPTVAK----LDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAVIPVLSF 316
RPT A +D + Q +GK DC+ ++ ++ + +IPP+ + +
Sbjct: 847 RPTSASNLEMIDGMSAQQKSRYGKRFVDCVVQFSKETGIATNVNANDMIPPELISKMQKV 906
Query: 317 LKD 325
L D
Sbjct: 907 LSD 909
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +2
Query: 374 VPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFF 553
+ R+ I ++ L+Y ++ + TYTD+++ + + C + + +Y
Sbjct: 70 IECRTCGHSISFHAEPLKYLSQEDLDTYTDQISDLQTCCSELSEIDPSHESLQTLYITMQ 129
Query: 554 ANHPDLRRIL-TDYGFEGHPFRKDFPLSGYVXVR 652
LR + D F G P + LS Y+ V+
Sbjct: 130 ILLKSLRTLTPVDVPFIGKPNFEPESLSPYILVK 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,094,975
Number of Sequences: 27780
Number of extensions: 325364
Number of successful extensions: 710
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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