Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_G07
         (869 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   5.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   7.2  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 720 PRIVRLGLIQHSIAISTDNPITQQRLXIFEK 812
           P IVR  L +H        P T Q+L   EK
Sbjct: 102 PPIVRCALRKHKPNRKPRTPFTTQQLLALEK 132


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
 Frame = -1

Query: 257 SLLPILTENSNFSHWKFRLKLL----LEEKQLSNVFLKEK 150
           SLLP + E +  S W+ R  ++    L   QL   F  EK
Sbjct: 405 SLLPAIVELAEDSKWRVRSAIIEYMPLLAGQLGREFFDEK 444


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,745
Number of Sequences: 336
Number of extensions: 3496
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)