Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_G07
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 75 9e-14
Z82058-5|CAI46585.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.5
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 30 2.5
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z82260-1|CAB05140.1| 332|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 10.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 10.0
AL032646-12|CAA21685.2| 411|Caenorhabditis elegans Hypothetical... 28 10.0
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 28 10.0
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 74.5 bits (175), Expect = 9e-14
Identities = 42/115 (36%), Positives = 66/115 (57%)
Frame = +3
Query: 525 ELTSLDEVISNSLKGKELEEFNRIHYGRIDQCALFISSDAAQKAASNGFEIKAYDFPARK 704
+ ++ ++ L G L+E RI YGR + AL ISS A + A F++ Y A+K
Sbjct: 7 QFDGVETALAEKLDGVSLDEVERILYGRPYR-ALEISSIAEKLAQDGDFQLSGYIVDAQK 65
Query: 705 EECRKPRIVRLGLIQHSIAISTDNPITQQRLXIFEKVQKIISAAAAXQVNILGLQ 869
E+ R PR+VR+ IQ+ I T + + +QR I ++V +I AAA+ N++GLQ
Sbjct: 66 EQTRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQ 120
>Z82058-5|CAI46585.1| 309|Caenorhabditis elegans Hypothetical
protein T27C5.12 protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2
Query: 481 LTPYHGYILYLIRLCRVNKNIICDIKKSLLILPHNIL 371
+ P+ Y Y I R NK I+C I+KS+ +L NI+
Sbjct: 49 IVPFINYTKYFITAPR-NKIIMCGIRKSMSLLSTNIM 84
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +3
Query: 573 ELEEFNRIHYGRIDQCALFISSDAAQKAASNGFEIKAYDFPARKEECRKPRIVR 734
ELE+ N H DQC+L +SS+ + A E K EEC R+ R
Sbjct: 475 ELEQSNAAHQSLRDQCSLLLSSEDDLRTAHLALESK---MTLVSEECIALRVSR 525
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 4 PADVFRSNLASNDVNISLVVFE 69
PADVFR ++ SN+ I ++ FE
Sbjct: 82 PADVFRGDMTSNECAICMIDFE 103
>Z82260-1|CAB05140.1| 332|Caenorhabditis elegans Hypothetical
protein C32H11.2 protein.
Length = 332
Score = 27.9 bits (59), Expect = 10.0
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = -2
Query: 460 ILYLIRLCRVNKNIICDIKKSL---LILPHNI--LTW*QIACAVSK*KYFGLRSTRNNIG 296
I YLI C N +I CDI K+ L++ NI L I +S K+ L + R N+
Sbjct: 171 ISYLIFSCHENCSIYCDILKNSYVGLLIFQNILLLVLLYIPIMLSVRKFSHLPAARENMP 230
Query: 295 ENY 287
E Y
Sbjct: 231 EKY 233
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 590 QNSLWKNRPMCFVYQFRCCPKSR 658
++S +N CF YQFRC K++
Sbjct: 172 KDSCSRNHTACFQYQFRCADKTQ 194
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 590 QNSLWKNRPMCFVYQFRCCPKSR 658
++S +N CF YQFRC K++
Sbjct: 172 KDSCSRNHTACFQYQFRCADKTQ 194
>AL032646-12|CAA21685.2| 411|Caenorhabditis elegans Hypothetical
protein Y54E2A.12 protein.
Length = 411
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 321 NPKYFYLLTAHAICYHVKMLCGRISRLFLISQI 419
NP++ Y H IC V ++CG + L + S +
Sbjct: 187 NPRFNYYQGFHDICLTVLLVCGEVDALPVCSNL 219
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 27.9 bits (59), Expect = 10.0
Identities = 24/90 (26%), Positives = 38/90 (42%)
Frame = +3
Query: 540 DEVISNSLKGKELEEFNRIHYGRIDQCALFISSDAAQKAASNGFEIKAYDFPARKEECRK 719
D+ + +L KEL+E R Q + + A+ EI+ + P ++EE
Sbjct: 10 DDEANKNLSKKELQELKRKQ-----QKSKKKKESKKRAKATKQAEIETREEPKKEEENGD 64
Query: 720 PRIVRLGLIQHSIAISTDNPITQQRLXIFE 809
V + I +I I DNP Q IF+
Sbjct: 65 DLDVEIDYIGETIEIEPDNPHAQYFSAIFD 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,482,965
Number of Sequences: 27780
Number of extensions: 335040
Number of successful extensions: 710
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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