Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_G05
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.9  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   6.4  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   6.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -3

Query: 738  CALSIFIIAAFIHHGYFDCFVFAHV-EVTVTGQSLV 634
            C  + FIIAA +H   F+C  +  +  VTV    L+
Sbjct: 983  CMAAEFIIAALLHPQEFNCLKYGVIYYVTVPSMYLL 1018


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -3

Query: 738  CALSIFIIAAFIHHGYFDCFVFAHV-EVTVTGQSLV 634
            C  + FIIAA +H   F+C  +  +  VTV    L+
Sbjct: 983  CMAAEFIIAALLHPQEFNCLKYGVIYYVTVPSMYLL 1018


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 151 ARMFTEVVKNNPGKSIVLS 207
           AR FT+ +KN  G  +V++
Sbjct: 434 ARFFTDCIKNREGFEMVIA 452


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 49  LWPASLECQTHTHRPA 2
           LWPA + C  ++ RP+
Sbjct: 189 LWPAWVYCTRYSDRPS 204


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
 Frame = -3

Query: 189 PWIIFHYFGKHS----GCEVIV--SIFEHIREICDGCHCRDGDSKQTNDCLHVC 46
           P  + H+F K S     C+ +   SIF  +  IC+ C+    + +  N C   C
Sbjct: 36  PAFLPHHFTKRSFFDIQCKGVYDKSIFAKLDSICEDCYMLFREPQLHNLCRSEC 89


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 312 YSIVVREADSFQK 274
           YSI++++ADSF K
Sbjct: 306 YSILIKKADSFCK 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.130    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,119
Number of Sequences: 336
Number of extensions: 3537
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)