Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_G04
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    35   6e-04
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    26   0.26 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    25   0.59 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.79 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.79 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   4.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   9.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 27/147 (18%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
 Frame = +2

Query: 92  KYTYRSSGGGTTDVNIEYSADLSALSRLEDKIRLIQDDLESERELRQRIEREKADLSVQV 271
           +Y + SS GG+  V  +    L   +++   ++  Q +   E ++++ +++    +   +
Sbjct: 152 QYVWESSAGGSFTVTQDRGEPLGRGTKIVLHMKEDQTEFLEEHKIKEIVKKHSQFIGYPI 211

Query: 272 IQLSERLEEAE-GGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHLLKKKNQEIVID 448
             + E+  E E    E++ E   +   +  K +  +EDV  + +E      KK ++ + +
Sbjct: 212 KLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKE 271

Query: 449 FQEQIDQLTKTKARAEKEKSKFQAEVY 529
              + ++L KTK    +       E Y
Sbjct: 272 KYTEDEELNKTKPIWTRNADDISQEEY 298



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 13/143 (9%)
 Frame = +2

Query: 302 EGGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHLLKKKNQEIVIDFQEQIDQLTKT 481
           E  A   F + + R   L +  K++  +H++ ++T  L + K +EIV    + I    K 
Sbjct: 156 ESSAGGSFTVTQDRGEPLGRGTKIV--LHMKEDQTEFLEEHKIKEIVKKHSQFIGYPIKL 213

Query: 482 KARAEKEK--SKFQAEVYELLAQVENVTKEKITIS-----------KTCERLEITISELH 622
               E+EK  S  +AE  +   + E+  K+K  I            K  ++ + TI E +
Sbjct: 214 VVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKY 273

Query: 623 IKIEELNRTIVDITSHKQRLSQE 691
            + EELN+T    T +   +SQE
Sbjct: 274 TEDEELNKTKPIWTRNADDISQE 296


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 300 LKAEPRASSRSTESVTPNSSSYANYWKMSIWS 395
           +K +   S+ ST S T  S++Y N    SIWS
Sbjct: 189 IKPQLHVSTGSTSSPTIASATYTNSANSSIWS 220


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 604 HHQRTPHQNRGTEPHHCGHHFPQAASV 684
           HH  +PH N    P+H  H  P A  V
Sbjct: 40  HH--SPHLNHAMHPYHANHVNPTANHV 64


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 322 VRDQQKA*HRTPQATQTTGRCPFGVRRDRPSAQEEEPRDRNRLPGTNRPAYQN*SQG*EG 501
           V + Q     T   TQ   R   G + + P+ Q++   ++N     N   +QN  QG +G
Sbjct: 324 VNEAQPYVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNKNHPNSENYINHQNYVQGYQG 383

Query: 502 E 504
           E
Sbjct: 384 E 384


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 322 VRDQQKA*HRTPQATQTTGRCPFGVRRDRPSAQEEEPRDRNRLPGTNRPAYQN*SQG*EG 501
           V + Q     T   TQ   R   G + + P+ Q++   ++N     N   +QN  QG +G
Sbjct: 272 VNEAQPYVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNKNHPNSENYINHQNYVQGYQG 331

Query: 502 E 504
           E
Sbjct: 332 E 332


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 572 TISKTCERLEITISELHIKIE-ELNRTIVDITSHKQRL 682
           T+ K  + LE+    +H   + + N T++D   HK+RL
Sbjct: 96  TLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHKKRL 133


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 572 TISKTCERLEITISELHIKIE-ELNRTIVDITSHKQRL 682
           T+ K  + LE+    +H   + + N T++D   HK+RL
Sbjct: 114 TLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHKKRL 151


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 339 SVTPNSSSYANYWKMSIWSQKRPPI 413
           +V  N   Y NY+   + S   PPI
Sbjct: 73  NVLSNGYGYGNYYHPQLHSHHGPPI 97


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 339 SVTPNSSSYANYWKMSIWSQKRPPI 413
           +V  N   Y NY+   + S   PPI
Sbjct: 73  NVLSNGYGYGNYYHPQLHSHHGPPI 97


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +2

Query: 293 EEAEGGAESQFEINRKRDTELLKLRKLLEDVHLESEETAHL 415
           E    GAE   +I  +RD   L+   LL + +  S   +H+
Sbjct: 74  ENGHMGAEFPLDIMMRRDMSRLEKSPLLANGYNHSPHLSHM 114


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 339 SVTPNSSSYANYWKMSIWSQKRPPI 413
           +V  N   Y NY+   + S   PPI
Sbjct: 73  NVLSNGYGYGNYYHPQLHSHHGPPI 97


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 339 SVTPNSSSYANYWKMSIWSQKRPPI 413
           +V  N   Y NY+   + S   PPI
Sbjct: 73  NVLSNGYGYGNYYHPQLHSHHGPPI 97


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/34 (26%), Positives = 11/34 (32%)
 Frame = +1

Query: 595 ARDHHQRTPHQNRGTEPHHCGHHFPQAASVPREH 696
           A+  +      N     HH GHH      V   H
Sbjct: 307 AQQQNNNNAATNNQNHHHHAGHHIHAQHHVVNHH 340


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +2

Query: 545 VENVTKEKITISKTCERLEITISELHIKIEELNRTIVDITSHKQRLSQ 688
           VE+      T +  C    I    +HIK+     +I+D T      SQ
Sbjct: 58  VEDEETSLATCNMLCSEPAIWPKPVHIKLTNRESSIIDKTKISFNFSQ 105


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 351 NSSSYANYWKMSIWSQKRP 407
           NSSS  N  +  +WS+K P
Sbjct: 43  NSSSCGNGNRCDLWSEKFP 61


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 331 DLELALGSAFSFLKP 287
           D EL   SAFS++KP
Sbjct: 145 DDELRSSSAFSYIKP 159


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 296 PQASQTVESLARSNLPSLFQSSDAALFRIPD 204
           PQ ++T ++     +P   +   + +FR+PD
Sbjct: 348 PQNAKTQKAFQVKRVPDPSKRKGSYIFRLPD 378


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 385 PFGVRRDRPSAQEEEPRDRNRLPGTN 462
           P+G ++   S      R+RNR+   N
Sbjct: 77  PYGPQQQPASVARRNARERNRVKQVN 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,845
Number of Sequences: 336
Number of extensions: 2190
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)