Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_G03
         (795 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130...    31   1.4  
03_05_0377 + 23613181-23613342,23614469-23614501,23614606-236148...    29   4.3  
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    29   5.6  
11_06_0102 + 20112731-20112928,20113314-20113514,20113606-201136...    28   9.8  

>03_01_0161 +
           1307206-1307769,1307979-1308101,1308182-1308286,
           1308688-1308867,1308988-1309050,1309151-1309345,
           1309704-1309805,1309885-1309947,1310045-1310113,
           1310215-1310270,1310587-1310755
          Length = 562

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 135 WNQWNMSSLGISLCYSSWNACSIKASR 215
           W+  N+ ++G+  C   WNACS K ++
Sbjct: 206 WSSHNILAVGLGNCVYLWNACSSKVTK 232


>03_05_0377 +
           23613181-23613342,23614469-23614501,23614606-23614879,
           23615105-23615585,23616174-23616846
          Length = 540

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/49 (28%), Positives = 18/49 (36%)
 Frame = -2

Query: 551 CVARRCDAPAGRPGSCDRGDS*WALQYLHRIGSSCRRSTAWLPRYNHYW 405
           C+   C  P GR  + D        +Y    G     S   + RY HYW
Sbjct: 315 CLCWLCGGPTGREHTWDSISGHSCNRYKEENGDKVDTSRQQMQRYTHYW 363


>07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-571542,
            571635-571885,572018-572128,572209-572320,572626-572716,
            573168-573507,573678-573900,573946-574204,574274-574481,
            574572-574622,574712-574870,574956-575120,575322-575399,
            575732-576031,576107-576259,576871-576918,577019-577188,
            577738-577852,578462-578623,578789-578893,578969-579199,
            579277-579410,579484-579738,579822-580110,580214-580306,
            580395-580520,580646-580897
          Length = 1693

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 362  INTFQKHLSGAGVSSNNDYIEEAKQYFAGKMIQYG 466
            +N F KHLSG+  S+++  +     +  G +++YG
Sbjct: 1127 VNIFYKHLSGSNSSNSDSQLLGRSLFCLGLLLRYG 1161


>11_06_0102 +
           20112731-20112928,20113314-20113514,20113606-20113695,
           20114269-20114457,20115375-20115387,20115824-20115990,
           20117334-20117522,20118940-20119053,20120912-20121010,
           20122368-20122490,20122579-20122701,20123179-20123277,
           20124786-20124842,20125136-20125182,20125296-20125439,
           20125540-20125717,20126318-20126398,20126480-20126563,
           20126624-20126629
          Length = 733

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +1

Query: 316 GSVPSVV--QHRRGLC*YQHVPEASERGWGVL 405
           GS+ +V+  +HRR +C Y +  +  + GWG+L
Sbjct: 141 GSLDTVISSEHRREICRYIYNHQNEDGGWGML 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,585,224
Number of Sequences: 37544
Number of extensions: 544210
Number of successful extensions: 1342
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)