Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_G03
(795 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128086-1|BAC87266.1| 820|Homo sapiens protein ( Homo sapiens ... 33 0.90
AK127024-1|BAC86793.1| 764|Homo sapiens protein ( Homo sapiens ... 33 0.90
AB067524-1|BAB67830.1| 704|Homo sapiens KIAA1937 protein protein. 31 3.6
Z84466-2|CAI42462.1| 705|Homo sapiens synapsin I protein. 30 8.4
Z84466-1|CAI42461.1| 669|Homo sapiens synapsin I protein. 30 8.4
M58378-2|AAC41931.1| 670|Homo sapiens synapsin Ib protein. 30 8.4
M58378-1|AAC41930.1| 705|Homo sapiens synapsin I protein. 30 8.4
AL009172-2|CAI42446.1| 705|Homo sapiens synapsin I protein. 30 8.4
AL009172-1|CAI42445.1| 669|Homo sapiens synapsin I protein. 30 8.4
AK027100-1|BAB15657.1| 363|Homo sapiens protein ( Homo sapiens ... 30 8.4
>AK128086-1|BAC87266.1| 820|Homo sapiens protein ( Homo sapiens
cDNA FLJ46207 fis, clone TESTI4010902, weakly similar
to Echinoderm microtubule-associated protein. ).
Length = 820
Score = 33.5 bits (73), Expect = 0.90
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 117 APTAGIWNQWNMSSLGISLCYSSWNACSIKASRARYTIFPASLVPKDSL 263
AP+ IW+ N +L I CY S CS+ S + L P+ ++
Sbjct: 586 APSIHIWDAMNKQTLSILRCYHSKGVCSVSFSATGKLLLSVGLDPEHTI 634
>AK127024-1|BAC86793.1| 764|Homo sapiens protein ( Homo sapiens
cDNA FLJ45080 fis, clone BRAWH3027806, weakly similar
to Echinoderm microtubule-associated protein-like 2. ).
Length = 764
Score = 33.5 bits (73), Expect = 0.90
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 117 APTAGIWNQWNMSSLGISLCYSSWNACSIKASRARYTIFPASLVPKDSL 263
AP+ IW+ N +L I CY S CS+ S + L P+ ++
Sbjct: 242 APSIHIWDAMNKQTLSILRCYHSKGVCSVSFSATGKLLLSVGLDPEHTI 290
>AB067524-1|BAB67830.1| 704|Homo sapiens KIAA1937 protein protein.
Length = 704
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +2
Query: 449 KMIQYGEGTEVPIKSLLGHRSQASPQVRHISGQRIKEFKEFLMKHPDTFQIIDDNVVLVS 628
KMI E + K + + + Q RH G+ I E+KE + +H T +++ + V+
Sbjct: 219 KMIMVEERLILQQKMVKALQDEQESQ-RHGFGEEIMEYKEQIKQHAQTIVSLEEKLQKVT 277
Query: 629 ENHRR 643
++H++
Sbjct: 278 QHHKK 282
>Z84466-2|CAI42462.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 369 RSRSI*AGLGCPPIMIISRKPSSTSPAR*SNTVKVLKCPSRVSSVTGARPPRRCVTSPG 545
+SR + G G PP +R P+S SP R + + +R +SV+G PP+ PG
Sbjct: 532 QSRPVAGGPGAPPA---ARPPASPSPQRQAGPPQA----TRQTSVSGPAPPKASGAPPG 583
>Z84466-1|CAI42461.1| 669|Homo sapiens synapsin I protein.
Length = 669
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 369 RSRSI*AGLGCPPIMIISRKPSSTSPAR*SNTVKVLKCPSRVSSVTGARPPRRCVTSPG 545
+SR + G G PP +R P+S SP R + + +R +SV+G PP+ PG
Sbjct: 532 QSRPVAGGPGAPPA---ARPPASPSPQRQAGPPQA----TRQTSVSGPAPPKASGAPPG 583
>M58378-2|AAC41931.1| 670|Homo sapiens synapsin Ib protein.
Length = 670
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 369 RSRSI*AGLGCPPIMIISRKPSSTSPAR*SNTVKVLKCPSRVSSVTGARPPRRCVTSPG 545
+SR + G G PP +R P+S SP R + + +R +SV+G PP+ PG
Sbjct: 532 QSRPVAGGPGAPPA---ARPPASPSPQRQAGPPQA----TRQTSVSGPAPPKASGAPPG 583
>M58378-1|AAC41930.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 369 RSRSI*AGLGCPPIMIISRKPSSTSPAR*SNTVKVLKCPSRVSSVTGARPPRRCVTSPG 545
+SR + G G PP +R P+S SP R + + +R +SV+G PP+ PG
Sbjct: 532 QSRPVAGGPGAPPA---ARPPASPSPQRQAGPPQA----TRQTSVSGPAPPKASGAPPG 583
>AL009172-2|CAI42446.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 369 RSRSI*AGLGCPPIMIISRKPSSTSPAR*SNTVKVLKCPSRVSSVTGARPPRRCVTSPG 545
+SR + G G PP +R P+S SP R + + +R +SV+G PP+ PG
Sbjct: 532 QSRPVAGGPGAPPA---ARPPASPSPQRQAGPPQA----TRQTSVSGPAPPKASGAPPG 583
>AL009172-1|CAI42445.1| 669|Homo sapiens synapsin I protein.
Length = 669
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 369 RSRSI*AGLGCPPIMIISRKPSSTSPAR*SNTVKVLKCPSRVSSVTGARPPRRCVTSPG 545
+SR + G G PP +R P+S SP R + + +R +SV+G PP+ PG
Sbjct: 532 QSRPVAGGPGAPPA---ARPPASPSPQRQAGPPQA----TRQTSVSGPAPPKASGAPPG 583
>AK027100-1|BAB15657.1| 363|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23447 fis, clone HSI03346. ).
Length = 363
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Frame = +3
Query: 420 SRKPSSTSPAR*--SNTVKVLKCPSRVS-----SVTGARPPRRCVTSPGN 548
S +P STSP R S + CP+ V+ S T + PP+ C+T P +
Sbjct: 12 SPEPLSTSPCRTTSSRNSPTMSCPASVACEPSTSTTTSSPPKACLTRPSS 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,491,027
Number of Sequences: 237096
Number of extensions: 3071007
Number of successful extensions: 9904
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9903
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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