Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_G03
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 149 2e-36
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 149 2e-36
Z99273-1|CAB16477.1| 645|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z82256-4|CAB05118.1| 636|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z47067-1|CAA87328.1| 776|Caenorhabditis elegans Hypothetical pr... 29 5.1
AC024204-1|AAF36040.3| 414|Caenorhabditis elegans Hypothetical ... 29 5.1
AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical ... 28 6.7
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 28 8.9
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 28 8.9
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 149 bits (362), Expect = 2e-36
Identities = 79/173 (45%), Positives = 112/173 (64%), Gaps = 6/173 (3%)
Frame = +2
Query: 152 ELARNLTLLFFVERLLDKGEPRTLHDLSCQFGAKGFTKEMRQIAGGSQSGLKKFLAQYPA 331
E A+N+ LLFF++ L+ K RT+HDLSCQFGA+GF++EMR G +Q GL +FL +P+
Sbjct: 2 EEAKNMALLFFMDHLMQKNGRRTIHDLSCQFGARGFSEEMRNAVGTTQEGLTEFLQGHPS 61
Query: 332 LFSIDGDYV------DINTFQKHLSGAGVSSNNDYIEEAKQYFAGKMIQYGEGTEVPIKS 493
LF+++GD V D+N L +G+ S N Y +EA +F K+ ++ G E+ IKS
Sbjct: 62 LFTVEGDQVILNGHNDLNAKNNPLLQSGIRSRN-YEKEAVDFFVTKLTKF--GPELQIKS 118
Query: 494 LLGHRSQASPQVRHISGQRIKEFKEFLMKHPDTFQIIDDNVVLVSENHRRDNA 652
LLGHRSQA+P+VR +SG+ +KEF EFL D F + D V L + +NA
Sbjct: 119 LLGHRSQAAPEVRLVSGRHLKEFCEFLQSQVDYFVVEGDRVRLKNMPEPDENA 171
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 149 bits (362), Expect = 2e-36
Identities = 79/173 (45%), Positives = 112/173 (64%), Gaps = 6/173 (3%)
Frame = +2
Query: 152 ELARNLTLLFFVERLLDKGEPRTLHDLSCQFGAKGFTKEMRQIAGGSQSGLKKFLAQYPA 331
E A+N+ LLFF++ L+ K RT+HDLSCQFGA+GF++EMR G +Q GL +FL +P+
Sbjct: 2 EEAKNMALLFFMDHLMQKNGRRTIHDLSCQFGARGFSEEMRNAVGTTQEGLTEFLQGHPS 61
Query: 332 LFSIDGDYV------DINTFQKHLSGAGVSSNNDYIEEAKQYFAGKMIQYGEGTEVPIKS 493
LF+++GD V D+N L +G+ S N Y +EA +F K+ ++ G E+ IKS
Sbjct: 62 LFTVEGDQVILNGHNDLNAKNNPLLQSGIRSRN-YEKEAVDFFVTKLTKF--GPELQIKS 118
Query: 494 LLGHRSQASPQVRHISGQRIKEFKEFLMKHPDTFQIIDDNVVLVSENHRRDNA 652
LLGHRSQA+P+VR +SG+ +KEF EFL D F + D V L + +NA
Sbjct: 119 LLGHRSQAAPEVRLVSGRHLKEFCEFLQSQVDYFVVEGDRVRLKNMPEPDENA 171
>Z99273-1|CAB16477.1| 645|Caenorhabditis elegans Hypothetical
protein Y45F10C.1 protein.
Length = 645
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 524 QVRHISGQRIKEFKEFLMKHPDTFQIIDDNVVLVSENHRRDNAHTNSEHF 673
Q ++ ++ K+F EFLM+H F + E +R+N+ T+S +
Sbjct: 119 QYGQLNDEKCKKFMEFLMQHTKDFVKPMSATQVFEEFKKRENSSTHSSMY 168
>Z82256-4|CAB05118.1| 636|Caenorhabditis elegans Hypothetical
protein B0513.6 protein.
Length = 636
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 524 QVRHISGQRIKEFKEFLMKHPDTFQIIDDNVVLVSENHRRDNAHTNSEHF 673
Q ++ ++ K+F EFLM+H F + E +R+N+ T+S +
Sbjct: 119 QYGQLNDEKCKKFMEFLMQHTKDFVKPMSATQVFEEFKKRENSSTHSSMY 168
>Z47067-1|CAA87328.1| 776|Caenorhabditis elegans Hypothetical
protein C43C3.1 protein.
Length = 776
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 572 LMKHPDTFQIIDDNVVLVSENHRRDNAHTNSEHFHNLPXANINTDTA 712
L + D Q+ D V ++ H + HT EH +NL + + +D++
Sbjct: 18 LSERQDLVQLNDQFVDIIEHVHYMEAEHTALEHDYNLLKSGVQSDSS 64
>AC024204-1|AAF36040.3| 414|Caenorhabditis elegans Hypothetical
protein Y73B6A.1 protein.
Length = 414
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/68 (20%), Positives = 34/68 (50%)
Frame = +2
Query: 344 DGDYVDINTFQKHLSGAGVSSNNDYIEEAKQYFAGKMIQYGEGTEVPIKSLLGHRSQASP 523
+G+ + N + HL+ ++++ I + GK+ + G+G I + + +A+
Sbjct: 131 EGERAEANLRRAHLNSLRKTTSSKRIHSWESLLTGKVEKLGQGNHGTIFKVRWNGRRAAM 190
Query: 524 QVRHISGQ 547
+V H+ G+
Sbjct: 191 KVLHVPGE 198
>AL110498-7|CAB57909.2| 302|Caenorhabditis elegans Hypothetical
protein Y64G10A.1 protein.
Length = 302
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 114 LAPTAGIWNQWNMSSLGISLCYSSWNACS 200
+ PT GIW++W +S G+ C ++ ACS
Sbjct: 22 ICPTGGIWSEW--TSTGV--CATTCGACS 46
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 398 VSSNNDYIEEAKQYFAGKMIQYGEGTEVPIKSLLGHRSQASPQVRHISGQRIKEFKEFL 574
+ N + E K+Y+A + YGEG E ++ + P V+ +S ++ + + FL
Sbjct: 55 IPQNQVVLHEDKKYYATALEVYGEGVETLVQE-EDAQPLTEPIVKPVSKKKFQAAERFL 112
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
assigned gene nameprotein 213 protein.
Length = 1437
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +2
Query: 509 SQASPQVRHISGQRIKEFKEFLMKHPD----TFQIIDDNVVLVSENHRRDNAHTNSEHFH 676
+Q + H+ +K ++ L + D + ++ID V+ E+ DNA T+ E+F
Sbjct: 8 TQLCLDIVHMKITPMKAYERILTEKKDRDAISSELIDVLVLTEPESEFADNASTSKENFE 67
Query: 677 NLPXANINTDTAQQLLXYIAQCIE 748
+ NT +++L C +
Sbjct: 68 SFVNLLTNTIIPEEILRLELDCFK 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,332,848
Number of Sequences: 27780
Number of extensions: 435073
Number of successful extensions: 1146
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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