Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_G02
(576 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 38 0.004
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 37 0.010
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.010
SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 36 0.018
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 36 0.031
SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18) 36 0.031
SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11) 36 0.031
SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10) 36 0.031
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 35 0.041
SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.041
SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04) 35 0.041
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 35 0.041
SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13) 35 0.055
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 34 0.072
SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06) 34 0.072
SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07) 34 0.072
SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22) 34 0.072
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 34 0.096
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 34 0.096
SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 34 0.096
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 33 0.13
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 33 0.17
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 33 0.17
SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035) 33 0.17
SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12) 33 0.17
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) 33 0.17
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 33 0.22
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 33 0.22
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015) 32 0.39
SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07) 31 0.51
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 31 0.51
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022) 31 0.67
SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12) 31 0.89
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048) 31 0.89
SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09) 30 1.2
SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29) 30 1.2
SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09) 30 1.2
SB_20784| Best HMM Match : Collagen (HMM E-Value=0.0036) 30 1.2
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45) 30 1.6
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 29 2.1
SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05) 29 2.1
SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003) 29 2.1
SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024) 29 2.1
SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031) 29 2.7
SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031) 29 2.7
SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 29 2.7
SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013) 29 2.7
SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12) 29 3.6
SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11) 29 3.6
SB_58047| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 28 4.8
SB_28365| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01) 28 4.8
SB_53235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_41255| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_24707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_24706| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_23692| Best HMM Match : Ribosomal_S26e (HMM E-Value=3.3) 28 4.8
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_59044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_54367| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_48755| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08) 28 6.3
SB_33015| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_20539| Best HMM Match : VWA (HMM E-Value=5.1848e-44) 28 6.3
SB_14932| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 28 6.3
SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 27 8.3
SB_31101| Best HMM Match : Collagen (HMM E-Value=0.14) 27 8.3
SB_20408| Best HMM Match : rve (HMM E-Value=0.0034) 27 8.3
SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078) 27 8.3
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 27 8.3
SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04) 27 8.3
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGA 446
+P EKG+ GFPG GP GP G G+EGA
Sbjct: 1474 IPGPRGEKGDSGFPGINGPPGPPGQRGYEGA 1504
Score = 35.9 bits (79), Expect = 0.024
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
P + G+RG PG GP+GP G+ G +GA+
Sbjct: 926 PGARGDIGSRGLPGEDGPRGPPGIQGMKGAK 956
Score = 34.3 bits (75), Expect = 0.072
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 321 INRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
+N N APG P KG G G GP+G GLPG +G
Sbjct: 1368 LNGNPGAPGVDGPT--GPKGESGIAGLDGPKGEPGLPGRDG 1406
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGP GPRG G +G
Sbjct: 1055 GPPGTPGQPGPPGPRGPEGRQG 1076
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
+P EKG+ G PG PG G RG G +G
Sbjct: 1335 MPGLDGEKGSAGVPGIPGGPGGRGFKGDQG 1364
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G+ GFPG PG +G RGL G +G
Sbjct: 1441 RGSDGFPGIPGSKGERGLIGPKG 1463
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
+ G G PG GP GP G PG +GA+
Sbjct: 862 DTGPSGEPGPAGPPGPLGTPGTQGAK 887
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G G G PGP+G GLPG GA
Sbjct: 906 GRDGMKGDPGPRGRDGLPGEPGA 928
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P EKG+ G PG G G GLPG +G
Sbjct: 1132 PGSLGEKGDAGIPGQRGLTGNPGLPGAQG 1160
Score = 31.9 bits (69), Expect = 0.39
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
PG PK E+G GFPG G QG +GL G G
Sbjct: 1218 PGPAGPK--GERGVNGFPGIKGIQGVQGLEGPPG 1249
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+KG+RG PG GP G G G +G
Sbjct: 1422 DKGDRGLPGPSGPPGEEGARGSDG 1445
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG +G PG GPQGP G+ G G
Sbjct: 269 KGVKGEPGPEGPQGPPGVRGDTG 291
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P +G +G PG PGP G G+PG G
Sbjct: 548 PGKMGPQGFKGDPGPPGPPGEVGVPGAPG 576
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G+ G PG G G RGLPG G
Sbjct: 680 EPGSPGLPGEDGAIGSRGLPGPSG 703
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGP+GP G G G
Sbjct: 1058 GTPGQPGPPGPRGPEGRQGFPG 1079
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G G PG PG QG +G PG +G
Sbjct: 1146 QRGLTGNPGLPGAQGLKGEPGRDG 1169
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
Frame = +3
Query: 372 EKGNRGFPGSP------GPQGPRGLPGHEG 443
EKG G PG P GP+G RG PG++G
Sbjct: 376 EKGEEGRPGLPGAQGIEGPKGERGEPGNQG 405
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G +GF G PGP GP G G GA
Sbjct: 552 GPQGFKGDPGPPGPPGEVGVPGA 574
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Frame = +3
Query: 372 EKGNRGFPGSP-----GPQGPRGLPGHEG 443
EKG GFPG P GP G +GL G+ G
Sbjct: 621 EKGPTGFPGPPGDSDYGPPGDKGLKGNTG 649
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG G PG GP G +G PG G
Sbjct: 1396 KGEPGLPGRDGPAGEKGSPGLSG 1418
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
EKG+ G G G +G RGLPG G
Sbjct: 1410 EKGSPGLSGLRGDKGDRGLPGPSG 1433
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
P EKG G G G +G GLPG +G E
Sbjct: 362 PGAPGEKGEPGKQGEKGEEGRPGLPGAQGIE 392
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG RG PG+ G +G RG+ G+ G
Sbjct: 395 KGERGEPGNQGLKGDRGVDGNPG 417
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGP G GL G +G
Sbjct: 700 GPSGEPGKPGPAGRAGLAGQDG 721
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGP---RGLPGHEG 443
+G G PG PG +G RGLPG +G
Sbjct: 917 RGRDGLPGEPGARGDIGSRGLPGEDG 942
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 357 PKCFAEKGNRGFP-GSPGPQGPRGLPGHEGAE 449
P +E GN P G PGP GPRG G G +
Sbjct: 1092 PPGTSEPGNVPGPKGDPGPAGPRGPAGRNGID 1123
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
VP G RGF G GP G G PG G +
Sbjct: 1347 VPGIPGGPGGRGFKGDQGPPGLNGNPGAPGVD 1378
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
PG P+ F KG+ G PG PG G G PG +G
Sbjct: 548 PGKMGPQGF--KGDPGPPGPPGEVGVPGAPGMKG 579
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+PG +GP G PG G
Sbjct: 567 GEVGVPGAPGMKGPIGKPGPVG 588
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPG 434
G RG G PG QGP G+PG
Sbjct: 764 GLRGDVGPPGEQGPTGVPG 782
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGP G G PG +G
Sbjct: 1007 GPPGRPGLPGPVGKEGPPGEDG 1028
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G +G G PGP G G PG +GA
Sbjct: 576 GMKGPIGKPGPVGDAGAPGEKGA 598
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G PGS G +G G+PG G
Sbjct: 1127 GTKGEPGSLGEKGDAGIPGQRG 1148
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+ G G G PGP GP G+ G +G
Sbjct: 1185 KNGINGLDGPPGPDGPAGVQGVKG 1208
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
GN G PG GP GP+G G G +
Sbjct: 1370 GNPGAPGVDGPTGPKGESGIAGLD 1393
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
+G++G G PGP GP PG EGA
Sbjct: 1420 RGDKGDRGLPGPSGP---PGEEGA 1440
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+G +G G PG GP G PG G E
Sbjct: 1478 RGEKGDSGFPGINGPPGPPGQRGYE 1502
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G PG GP GP G G +G
Sbjct: 297 GTQGLPGPKGPPGPTGPEGPKG 318
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G G GPQGP G PG +G
Sbjct: 513 GPPGPDGDRGPQGPTGFPGTKG 534
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
++G G PG+PG G G PG +G +
Sbjct: 794 KQGPPGDPGNPGTDGLPGAPGRDGID 819
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 387 GFPGSPGPQGPRGLPGHEGAE 449
G G PGP GP G+ G +G +
Sbjct: 840 GIDGPPGPPGPPGVTGEQGVK 860
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+G +G G PGP GP G G GA+
Sbjct: 1239 QGVQGLEGPPGPPGPPGQIGFTGAK 1263
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +3
Query: 378 GNRGFPGSPGPQ---GPRGLPGHEG 443
G G PG PGP+ GP G PG G
Sbjct: 989 GQNGLPGIPGPKGDTGPVGPPGRPG 1013
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG GP+G RG+ G G
Sbjct: 1213 GQPGLPGPAGPKGERGVNGFPG 1234
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG GP GP G PG G
Sbjct: 1298 GLSGIPGERGPVGPAGPPGLPG 1319
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G RG+ G+ GP G +G G +G
Sbjct: 1497 GQRGYEGARGPPGAKGQAGEDG 1518
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G G PGP+GP G G EG
Sbjct: 294 GLNGTQGLPGPKGPPGPTGPEG 315
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G GFPG+ G QG G PG G
Sbjct: 524 QGPTGFPGTKGNQGIAGPPGQIG 546
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 366 FAEKGNRGFPGSPGPQGPRGLPGHEG 443
+ G++G G+ GP G G+PG G
Sbjct: 636 YGPPGDKGLKGNTGPPGDEGVPGPIG 661
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
EKG G PG G G +GL G G
Sbjct: 1032 EKGYAGLPGPRGETGEKGLDGPSG 1055
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G G G GP GP G PG G
Sbjct: 1042 RGETGEKGLDGPSGPPGTPGQPG 1064
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G PG GP+GP G G +G
Sbjct: 1103 GPKGDPGPAGPRGPAGRNGIDG 1124
Score = 27.5 bits (58), Expect(2) = 0.046
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGP 419
KG+RG G+PGP GP
Sbjct: 407 KGDRGVDGNPGPIGP 421
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G G PG PG +G G PG +G
Sbjct: 753 QQGGIGNPGPPGLRGDVGPPGEQG 776
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +3
Query: 375 KGNRG--FPGSPGPQGPRGLPGHEG 443
KG +G G GP GP GLPG G
Sbjct: 953 KGAKGDAITGPTGPPGPPGLPGRPG 977
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG+PG GP G G EG +
Sbjct: 1052 GPSGPPGTPGQPGPPGPRGPEGRQ 1075
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG +G G GP GP G PG G
Sbjct: 1236 KGIQGVQGLEGPPGPPGPPGQIG 1258
Score = 26.2 bits (55), Expect(2) = 0.046
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 393 PGSPGPQGPRGLPGHEGAE 449
PG PG G G+PG G +
Sbjct: 458 PGEPGASGRPGIPGRPGTQ 476
>SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 1311
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+GP GP GP+ P P+GP P P
Sbjct: 1126 PVGPVGPVGPVGPVGPVDPVGPVGPVGP 1153
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+GP GP GP+ P P+GP P P
Sbjct: 1129 PVGPVGPVGPVGPVDPVGPVGPVGPVGP 1156
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+GP GP GP+ P P+GP P P
Sbjct: 1141 PVDPVGPVGPVGPVGPVGPVGPVGPVGP 1168
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+GP GP GP+ P P+GP P P
Sbjct: 1144 PVGPVGPVGPVGPVGPVGPVGPVGPVGP 1171
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+GP GP GP+ P P+GP P P
Sbjct: 1120 PVGPVGPVGPVGPVGPVGPVGPVDPVGP 1147
Score = 37.1 bits (82), Expect = 0.010
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSA 443
P+ P+GP GP GP+ P P+GP P A
Sbjct: 1147 PVGPVGPVGPVGPVGPVGPVGPVGPVA 1173
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
PL P+GP GP G + P P+GP P P
Sbjct: 1105 PLGPVGPVGPVGLVGPVGPVGPVGPVGP 1132
Score = 35.5 bits (78), Expect = 0.031
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+GP GP GP+ P P+ P P P
Sbjct: 1123 PVGPVGPVGPVGPVGPVGPVDPVGPVGP 1150
Score = 35.5 bits (78), Expect = 0.031
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+GP GP P+ P P+GP P P
Sbjct: 1132 PVGPVGPVGPVDPVGPVGPVGPVGPVGP 1159
Score = 35.5 bits (78), Expect = 0.031
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+GP P GP+ P P+GP P P
Sbjct: 1135 PVGPVGPVDPVGPVGPVGPVGPVGPVGP 1162
Score = 35.5 bits (78), Expect = 0.031
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+ P GP GP+ P P+GP P P
Sbjct: 1138 PVGPVDPVGPVGPVGPVGPVGPVGPVGP 1165
Score = 34.7 bits (76), Expect = 0.055
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 520 LSPLGPRGPCGPI*PFCPLGPCAPSAP 440
+ P+GP GP GP+ P P+GP P P
Sbjct: 1118 VGPVGPVGPVGPVGPVGPVGPVGPVDP 1144
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+GP G GP+ P P+GP P P
Sbjct: 1108 PVGPVGPVGLVGPVGPVGPVGPVGPVGP 1135
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ P+G GP GP+ P P+GP P P
Sbjct: 1111 PVGPVGLVGPVGPVGPVGPVGPVGPVGP 1138
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P+ +GP GP GP+ P P+GP P P
Sbjct: 1114 PVGLVGPVGPVGPVGPVGPVGPVGPVGP 1141
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 508 GPRGPCGPI*PFCPLGPCAPSAP 440
GP GP GP+ P +GP P P
Sbjct: 1104 GPLGPVGPVGPVGLVGPVGPVGP 1126
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E+G RG PG PG GP GLPG G
Sbjct: 307 EEGGRGRPGKPGADGPEGLPGPAG 330
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGP+G +G PG G
Sbjct: 52 GPPGAPGQPGPRGIKGPPGRAG 73
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PGS G GP G PG +G
Sbjct: 336 GENGAPGSRGNSGPAGFPGAKG 357
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G G PG+PG GPRG+ G G
Sbjct: 48 QGPPGPPGAPGQPGPRGIKGPPG 70
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G++G PG PG G RG G G
Sbjct: 250 ESGDKGQPGKPGKPGSRGQAGPAG 273
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G GS GP GP G PG G
Sbjct: 40 GPSGRGGSQGPPGPPGAPGQPG 61
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
+KG+ G PGS GP GP G PG +GA+
Sbjct: 142 QKGSSGDPGSEGPVGPPGKPGMDGAK 167
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG+RG PG G G +G GHEG
Sbjct: 558 KGDRGSPGVSGASGAKGAKGHEG 580
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Frame = +3
Query: 378 GNRGFPGSPGPQGP---RGLPGHEG 443
G+ G G+PGPQGP RG+PG +G
Sbjct: 760 GSDGAQGNPGPQGPTGTRGIPGPQG 784
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
+G G PG GP+G RG PG GA
Sbjct: 546 QGAAGMPGPAGPKGDRGSPGVSGA 569
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
E+G +G G PG +GP G PG G +
Sbjct: 139 EQGQKGSSGDPGSEGPVGPPGKPGMD 164
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G RG G+ GP+GPRG+ G G +
Sbjct: 598 GARGKQGANGPRGPRGIKGASGLQ 621
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G G PG PGP GP G G G
Sbjct: 830 EAGQPGPPGPPGPNGPVGQTGQPG 853
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+PGP G G PG G
Sbjct: 847 GQTGQPGTPGPDGAAGEPGARG 868
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
E G +G PG+ G +G G PG EGA
Sbjct: 375 EAGRQGPPGANGDRGQPGAPGAEGA 399
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G+RG PG+PG +G G G++G+
Sbjct: 386 GDRGQPGAPGAEGAMGEKGNQGS 408
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG+RG G GP GP G G +G
Sbjct: 726 KGSRGIAGEAGPDGPAGPAGLDG 748
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G G PG PGP GP G G G
Sbjct: 828 EGEAGQPGPPGPPGPNGPVGQTG 850
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G G PG G RG PG GAE
Sbjct: 374 GEAGRQGPPGANGDRGQPGAPGAE 397
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G G G PGPQGP G G G
Sbjct: 795 RGPSGKNGEPGPQGPEGEAGANG 817
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+G+ G PG+ G GPRG G G +
Sbjct: 355 QGSSGVPGAQGMPGPRGSTGEAGRQ 379
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G +G G PGP+G RG+ G G +
Sbjct: 715 GLQGQRGPPGPKGSRGIAGEAGPD 738
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G PG G QGP GL G G
Sbjct: 700 GAQGAPGEGGLQGPIGLQGQRG 721
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 37.1 bits (82), Expect = 0.010
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3
Query: 387 GFPGSPGPQGPRGLPGHEGA 446
G PG PGP GPRG+PG GA
Sbjct: 505 GLPGPPGPAGPRGIPGLPGA 524
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G +G G GP GP G PG G
Sbjct: 467 RGPQGVRGDRGPPGPAGPPGPSG 489
>SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG G PG GP GP G PGH+G
Sbjct: 43 KGKSGLPGDKGPVGPPGHPGHKG 65
Score = 33.9 bits (74), Expect = 0.096
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E+G++G G PG +GP G PGH G
Sbjct: 39 ERGSKGKSGLPGDKGPVGPPGHPG 62
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G G+PG +GPRG PG +G
Sbjct: 2 GLMGSRGTPGDRGPRGPPGEQG 23
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G+RG PG GP+GP G G G +
Sbjct: 5 GSRGTPGDRGPRGPPGEQGFSGVK 28
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G G PGP G G+PG +G +
Sbjct: 128 GKAGSIGDPGPNGASGMPGFDGTK 151
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G +G PG PG QG G PG G E
Sbjct: 98 GFKGLPGPPGFQGDPGKPGIRGHE 121
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
+KG G PG PG +GP G G GA
Sbjct: 51 DKGPVGPPGHPGHKGPTGESGPTGA 75
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G+RG G PG QG G+ G EG +
Sbjct: 11 GDRGPRGPPGEQGFSGVKGKEGRD 34
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P EKGNRG G GP+GP G PG +G
Sbjct: 31 PGSKGEKGNRGRRGRRGPRGPPGKPGADG 59
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/73 (32%), Positives = 29/73 (39%)
Frame = +3
Query: 225 RNDIPPQSRPEPELGQNFAVYDPDTRQRTSTAINRNCTAPGCCVPKCFAEKGNRGFPGSP 404
+ ++ P PE Q D +R N G P+ EKGN G PGS
Sbjct: 3664 KGEVGPPGPPERIDNQTLLAAKGDKGERGFPGNNGGKGERGAQGPR--GEKGNTGAPGSQ 3721
Query: 405 GPQGPRGLPGHEG 443
G GPRG G G
Sbjct: 3722 GSTGPRGPIGQPG 3734
Score = 34.7 bits (76), Expect = 0.055
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG+ GFPG PG G RGL G EG
Sbjct: 3745 KGDPGFPGLPGQAGLRGLQGPEG 3767
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
E G G GSPG GP G PG G++
Sbjct: 3603 ESGTPGLDGSPGKDGPTGSPGDPGSK 3628
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 393 PGSPGPQGPRGLPGHEGAE 449
PG PGPQGP G PG G +
Sbjct: 3823 PGPPGPQGPPGPPGPPGRD 3841
Score = 31.1 bits (67), Expect = 0.67
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Frame = +3
Query: 372 EKGNRGFPGSPG------PQGPRGLPGHEGA 446
+KG RGFPG+ G QGPRG G+ GA
Sbjct: 3687 DKGERGFPGNNGGKGERGAQGPRGEKGNTGA 3717
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +3
Query: 375 KGNRGFPGS---PGPQGPRGLPGHEG 443
KG++GFPG PG +G GLPG G
Sbjct: 3330 KGDKGFPGMVGFPGLRGKTGLPGKPG 3355
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG GP GPRG+ G +G++
Sbjct: 3510 GIDGPPGDAGPVGPRGINGIQGSQ 3533
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 339 APGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
APG +P G GFPG G G RGL G +G
Sbjct: 3481 APG--IPGRNGTAGPPGFPGLKGSPGERGLSGIDG 3513
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPG 434
+KG+ G PG PG G +G+PG
Sbjct: 3768 QKGSIGAPGIPGKIGEKGVPG 3788
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 345 GCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
G C C +++ R G GPQGP GL G +G
Sbjct: 3300 GTCSSNC-SQQVIRVLKGEQGPQGPPGLKGIKG 3331
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G GSPG G G+PG G
Sbjct: 3468 GPPGLAGSPGQTGAPGIPGRNG 3489
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
+ G G PG G GP G PG +G+
Sbjct: 3478 QTGAPGIPGRNGTAGPPGFPGLKGS 3502
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G G PG PG +G RG G GA
Sbjct: 3617 GPTGSPGDPGSKGDRGETGDVGA 3639
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
++G RG PGSPGP+G G G GA
Sbjct: 151 QRGRRGNPGSPGPKGTPGKDGRRGA 175
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G RG G+PG GP+G PG +G
Sbjct: 149 RGQRGRRGNPGSPGPKGTPGKDG 171
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 402 PGPQGPRGLPGHEG 443
PGP+GP G PGH G
Sbjct: 128 PGPRGPPGRPGHPG 141
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 312 STAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
S A+ R C P +G G PG PG +G RG G G
Sbjct: 112 SPAVIRLCMGGSLTCPP--GPRGPPGRPGHPGQKGTRGRRGQRG 153
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
+G RGF G PG GPRGL G GA
Sbjct: 195 RGYRGFTGKPGLTGPRGLKGARGA 218
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG RG G GPQGPRG G +G
Sbjct: 369 KGVRGATGLRGPQGPRGFTGKQG 391
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG RG G GP GPRGL G G
Sbjct: 129 KGIRGLRGLKGPIGPRGLKGSRG 151
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGA 446
VP + G G PG GPQG +GL G GA
Sbjct: 395 VPGRTGKTGANGKPGLRGPQGLKGLKGKTGA 425
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G RG+ G+ GP+G RGL G +G
Sbjct: 116 KQGPRGWTGARGPKGIRGLRGLKG 139
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
VP KG G G+ GP+G RGL G +G
Sbjct: 290 VPGRPGSKGKTGARGATGPRGLRGLRGPQG 319
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G RG GS G GPRGL G +G
Sbjct: 142 GPRGLKGSRGFMGPRGLRGLKG 163
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
+ G G G+ GP+G RGL G +GA
Sbjct: 245 KNGRPGAKGAMGPRGYRGLTGSKGA 269
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG +G G+ GP+G RGL G G
Sbjct: 417 KGLKGKTGATGPRGLRGLKGSRG 439
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+GN+G G G +G +G PG GA+
Sbjct: 318 QGNQGLRGLKGSRGVQGRPGKNGAK 342
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+KG +G G+ G +GPRG G +G
Sbjct: 476 QKGAKGARGTQGVRGPRGYRGPQG 499
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG+ G GPRG G G++
Sbjct: 244 GKNGRPGAKGAMGPRGYRGLTGSK 267
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+G +G G G +GP+GL G +GA+
Sbjct: 483 RGTQGVRGPRGYRGPQGLRGPQGAK 507
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
+P +G RG G PGP+GP G+ G EG +
Sbjct: 57 LPGKLGHQGKRGRRGKPGPEGPAGVQGMEGRQ 88
Score = 34.7 bits (76), Expect = 0.055
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E+G+ G PG PG G +GLPG +G
Sbjct: 1136 EQGSYGLPGKPGSPGTKGLPGPKG 1159
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
PG PK E G+RG PG+ G QG RG G G
Sbjct: 109 PGVRGPK--GESGSRGLPGNHGVQGERGSQGGRG 140
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G RG PG PG +G RG PG +G
Sbjct: 221 GMRGLPGPPGRRGKRGDPGSDG 242
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
++G RG PG GP G +G+ G +G +
Sbjct: 66 KRGRRGKPGPEGPAGVQGMEGRQGVQ 91
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 369 AEKGNRGFPGSPGPQGPRGLPGHEG 443
A G+RG G PG G +G+PG +G
Sbjct: 404 AAMGSRGRTGYPGRNGRQGMPGADG 428
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 6/30 (20%)
Frame = +3
Query: 378 GNRGFPGSPGPQGP------RGLPGHEGAE 449
G G PG PG +GP RGLPG+ G +
Sbjct: 101 GPNGAPGRPGVRGPKGESGSRGLPGNHGVQ 130
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G +G G GP GP G PG G
Sbjct: 88 QGVQGKDGEEGPPGPNGAPGRPG 110
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G GS GP GP+G+ G G
Sbjct: 179 GLMGIQGSEGPYGPQGMTGDRG 200
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G+ G G GP GP GLPG G
Sbjct: 434 GSAGLMGVRGPVGPEGLPGAIG 455
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
GN G G G QG RG+ G G E
Sbjct: 125 GNHGVQGERGSQGGRGIKGGRGNE 148
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRG 425
+G +GF G+PGP G G
Sbjct: 521 RGEQGFTGNPGPDGKNG 537
>SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18)
Length = 427
Score = 35.5 bits (78), Expect = 0.031
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +GFPG+PG QG +G+PG G
Sbjct: 132 GLKGFPGTPGDQGRQGVPGKRG 153
Score = 35.5 bits (78), Expect = 0.031
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 315 TAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
TAI N G +P + KG+RG PG G G RG PG +G
Sbjct: 240 TAILPNKAMIGA-IPPFYGPKGDRGVPGRQGMYGLRGPPGRKG 281
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 351 CVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
C + KG G PG PG GP G PG +G
Sbjct: 202 CGMRFQGSKGTPGAPGDPGLYGPPGPPGKKG 232
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KGN+GFPG G G GL G G
Sbjct: 116 KGNQGFPGPMGLDGIPGLKGFPG 138
>SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11)
Length = 476
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 363 CFAEKGNRGFPGS---PGPQGPRGLPGHEGAE 449
C + +G RG PG PGPQGP G G +G E
Sbjct: 112 CKSRRGKRGEPGPQGPPGPQGPTGAKGDQGPE 143
Score = 34.3 bits (75), Expect = 0.072
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 360 KCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
+C K RG G PGPQGP G G GA+
Sbjct: 108 ECITCKSRRGKRGEPGPQGPPGPQGPTGAK 137
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G RG G GPQGP+GL G G
Sbjct: 149 QGIRGPEGPQGPQGPQGLEGKAG 171
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
PG P + RG G GP G RGL G +G +
Sbjct: 365 PGRAPPDLKVTREIRGSKGPQGPNGTRGLQGEKGPQ 400
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G +G G GPQGP+G G EG
Sbjct: 146 QGPQGIRGPEGPQGPQGPQGLEG 168
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
E G +G PG GP G +G G EG +
Sbjct: 121 EPGPQGPPGPQGPTGAKGDQGPEGIQ 146
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
KG++G G GPQG RG G +G +
Sbjct: 137 KGDQGPEGIQGPQGIRGPEGPQGPQ 161
>SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10)
Length = 106
Score = 35.5 bits (78), Expect = 0.031
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +GFPG+PG QG +G+PG G
Sbjct: 31 GLKGFPGTPGDQGRQGVPGKRG 52
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KGN+GFPG G G GL G G
Sbjct: 15 KGNQGFPGPMGLDGIPGLKGFPG 37
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
++G +G PG G G +G G +GA
Sbjct: 41 DQGRQGVPGKRGDDGAKGREGEDGA 65
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3
Query: 384 RGFPGSPGPQGPRGLPGHEG 443
RG PG PGPQGP+G PG G
Sbjct: 121 RGPPGPPGPQGPKGDPGVRG 140
>SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 35.1 bits (77), Expect = 0.041
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGP GP G PG G
Sbjct: 128 GKNGIPGHPGPPGPSGPPGRNG 149
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G RG PG PG G G PG G
Sbjct: 168 KRGRRGHPGEPGRNGTHGSPGWRG 191
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
+P + G G PG PGP GP G G G
Sbjct: 123 IPGTHGKNGIPGHPGPPGPSGPPGRNGLNG 152
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G PG PG +G RG PG G
Sbjct: 158 GKQGPPGPPGKRGRRGHPGEPG 179
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG G QGP G PG G
Sbjct: 149 GLNGIPGVSGKQGPPGPPGKRG 170
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G G PGP G RG GH G
Sbjct: 155 GVSGKQGPPGPPGKRGRRGHPG 176
>SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04)
Length = 181
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3
Query: 384 RGFPGSPGPQGPRGLPGHEG 443
RG PG PGPQGP+G PG G
Sbjct: 121 RGPPGPPGPQGPKGDPGVRG 140
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 35.1 bits (77), Expect = 0.041
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Frame = +3
Query: 237 PPQSRPEPELGQNFAVYDPDTRQRTSTAINRNCTAPGC---CVPKC---FAEKGNRGFPG 398
P + PEP+ N D Q + + C GC CVP RG PG
Sbjct: 50 PAECPPEPD---NECENDAGCAQ-LNPGLGLKCCKDGCDFRCVPPIPPPTPPPQRRGPPG 105
Query: 399 SPGPQGPRGLPGHEG 443
PGP+G +G PG +G
Sbjct: 106 DPGPKGNKGQPGAQG 120
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P + + G G PG GP GP+G PG EG
Sbjct: 943 PGKYGDDGLEGSPGPRGPIGPQGDPGPEG 971
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G+ G GSPGP+GP G G G E
Sbjct: 947 GDDGLEGSPGPRGPIGPQGDPGPE 970
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P E G G PG GP G GLPG +G
Sbjct: 226 PGLVGEPGPEGEPGPVGPTGVPGLPGVKG 254
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G RG PG PG G +G G G
Sbjct: 201 EPGERGEPGEPGAAGAKGAKGQPG 224
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G G PGP GP G+PG G +
Sbjct: 230 GEPGPEGEPGPVGPTGVPGLPGVK 253
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+ G +G PG+PG +G RG G +G
Sbjct: 115 QPGAQGRPGAPGDRGERGSAGSDG 138
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
EKG +G G GP G G PG G
Sbjct: 264 EKGEQGKTGERGPVGEAGRPGQNG 287
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E+G G PG+ G +G +G PG G
Sbjct: 204 ERGEPGEPGAAGAKGAKGQPGPPG 227
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G G PGP G G PG EG
Sbjct: 215 GAKGAKGQPGPPGLVGEPGPEG 236
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLP 431
+G RG G PGP GP G P
Sbjct: 970 EGERGQSGPPGPPGPPGPP 988
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGP 419
E+G G PG PGP GP
Sbjct: 972 ERGQSGPPGPPGPPGP 987
>SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 34.7 bits (76), Expect = 0.055
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
+ K +G RGF GS GP GP+GL G G
Sbjct: 676 IAKMEGPQGPRGFNGSEGPVGPKGLKGDPG 705
>SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13)
Length = 456
Score = 34.7 bits (76), Expect = 0.055
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
+ K +G RGF GS GP GP+GL G G
Sbjct: 266 IAKMEGPQGPRGFNGSEGPVGPKGLKGDPG 295
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 34.3 bits (75), Expect = 0.072
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G GFPG+PG QGP GL G GA
Sbjct: 265 GAPGFPGAPGFQGPPGLDGMPGA 287
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G G PG+PG GP+G PG GA
Sbjct: 280 GLDGMPGAPGMPGPQGYPGGSGA 302
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 339 APGCCVPKCF-AEKGNRGFPGSPGPQGPRGLPG 434
APG P+ + G G PGSPG GP G G
Sbjct: 287 APGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAG 319
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G +G PG PG GP+G+PG+ GA
Sbjct: 1689 GPKGPPGPPGLPGPQGIPGYPGA 1711
Score = 33.9 bits (74), Expect = 0.096
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 393 PGSPGPQGPRGLPGHEGAE 449
PG PGP GP GLPG +G +
Sbjct: 1670 PGPPGPDGPMGLPGPQGPD 1688
Score = 33.9 bits (74), Expect = 0.096
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGPQGP+G PG G
Sbjct: 1823 GLDGPPGPPGPQGPKGWPGVPG 1844
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG GPQGP+G+PG G
Sbjct: 1780 GVDGPPGLAGPQGPKGMPGPPG 1801
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P +G +G PG PGP GP G G +G
Sbjct: 1785 PGLAGPQGPKGMPGPPGPPGPPGAIGWKG 1813
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G +G+PG PGP GP G G +G
Sbjct: 1834 QGPKGWPGVPGPPGPPGAYGWKG 1856
Score = 31.1 bits (67), Expect = 0.67
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG GP GP+G PG G
Sbjct: 1677 GPMGLPGPQGPDGPKGPPGPPG 1698
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPG 434
KG G PG PGPQG G PG
Sbjct: 1691 KGPPGPPGLPGPQGIPGYPG 1710
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G G GP GP GLPG +G
Sbjct: 1683 GPQGPDGPKGPPGPPGLPGPQG 1704
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
PG P+ KG G PG PGP G G G+ G
Sbjct: 1785 PGLAGPQ--GPKGMPGPPGPPGPPGAIGWKGNPG 1816
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG G PG PGP G G G+ G
Sbjct: 1837 KGWPGVPGPPGPPGAYGWKGYPG 1859
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +3
Query: 378 GNRGFPGSPGPQ---GPRGLPGHEG 443
G G PG PG Q GP G+PG G
Sbjct: 1866 GRDGIPGPPGRQGGKGPAGIPGIPG 1890
>SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06)
Length = 88
Score = 34.3 bits (75), Expect = 0.072
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+G +G+ G+PGP+G G PG +G E
Sbjct: 21 RGPQGYQGAPGPKGTGGFPGEKGDE 45
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG GFPG G +GPRG G G
Sbjct: 33 KGTGGFPGEKGDEGPRGEDGSAG 55
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG+RG G GPQG +G PG +G
Sbjct: 12 KGDRGPIGPRGPQGYQGAPGPKG 34
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
+G G G GP GPRG G++GA
Sbjct: 6 EGPPGPKGDRGPIGPRGPQGYQGA 29
>SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07)
Length = 621
Score = 34.3 bits (75), Expect = 0.072
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP+GP GP P P GP P PS
Sbjct: 51 PQGPNGPQGPNGPQGPNGPQGPSGPQGPS 79
Score = 34.3 bits (75), Expect = 0.072
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP+GP GP P P GP P P+
Sbjct: 69 PQGPSGPQGPSGPQVPNGPQGPSGPQGPN 97
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP+GP GP P P GP P P+
Sbjct: 57 PQGPNGPQGPNGPQGPSGPQGPSGPQVPN 85
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP+GP GP P P P P PS
Sbjct: 63 PQGPNGPQGPSGPQGPSGPQVPNGPQGPS 91
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGP 458
P P GP+GP GP P P GP
Sbjct: 81 PQVPNGPQGPSGPQGPNGPQGP 102
>SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22)
Length = 767
Score = 34.3 bits (75), Expect = 0.072
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 396 GSPGPQGPRGLPGHEGA 446
GSPGP+GPRGL G+ GA
Sbjct: 230 GSPGPRGPRGLRGYRGA 246
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPG 434
+G RG+ G+ G GPRGLPG
Sbjct: 238 RGLRGYRGARGHTGPRGLPG 257
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 33.9 bits (74), Expect = 0.096
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
E+G+ G PG G GPRG PG EG+
Sbjct: 16 EQGDAGPPGPEGNMGPRGQPGPEGS 40
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+GN G G PGP+G GLPG G
Sbjct: 26 EGNMGPRGQPGPEGSPGLPGERG 48
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G GSPGP+GP G PG G +
Sbjct: 894 GPPGLAGSPGPRGPNGEPGDPGMD 917
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG RG G+PGP GP G G G
Sbjct: 473 KGLRGMTGNPGPNGPAGATGPPG 495
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
P F G G PG PG +G G PG GA+
Sbjct: 940 PGPFGAAGLDGMPGKPGAKGESGQPGMRGAD 970
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+ G RG PG PGP GP G G +G
Sbjct: 927 DAGPRGPPGEPGPPGPFGAAGLDG 950
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSP-----GPQGPRGLPGHEGAE 449
PG +P + G GFPG P G G GLPG GA+
Sbjct: 576 PGDAIPGNPGDPGVMGFPGEPQRGEPGDPGRPGLPGQTGAD 616
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G RG G G GP+GLPG +G
Sbjct: 425 KEGPRGPDGRDGQSGPKGLPGDDG 448
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G+ G PG PG G GLPG G
Sbjct: 874 EAGSDGRPGFPGESGANGLPGPPG 897
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Frame = +3
Query: 237 PPQSRPEP---ELGQNFAVYDPDTRQRTSTAINRNCTAPGCCVPKCFAEKGNRGFPGSPG 407
PP+ P P E GQ+ P T + P + K KG G G G
Sbjct: 368 PPRFVPVPDHGEKGQSGEPGFPGEIGEAGTQGEKGNPPPTPIIIKYKGPKGTSGAQGKEG 427
Query: 408 PQGPRGLPGHEG 443
P+GP G G G
Sbjct: 428 PRGPDGRDGQSG 439
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G RG G PGP+G +G PG G
Sbjct: 45 GERGTGGVPGPKGKQGAPGTIG 66
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
+ G G PG PG +G G+PG +G +
Sbjct: 34 QPGPEGSPGLPGERGTGGVPGPKGKQ 59
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G RG PG PG G RG G G
Sbjct: 233 ETGPRGRPGEPGADGVRGPDGSTG 256
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G+ G G PGP+G G PG G E
Sbjct: 306 GDLGPDGPPGPKGAPGAPGFSGIE 329
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 339 APGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
+PG P G G G GP GP+G PG G +
Sbjct: 108 SPGA--PGIIGMNGAMGKKGDTGPLGPKGQPGSPGID 142
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 366 FAEKGNRGFPGSPGPQGPRGLPGHEG 443
F G +G G GP G GLPG +G
Sbjct: 520 FGLPGRKGDSGDRGPDGNPGLPGQKG 545
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 342 PGCCVPKC-FAEKGNRGFPGSPGPQGPRGLPGHEG 443
P C +C +KG G G+ G QGP G PG G
Sbjct: 175 PFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPG 209
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQ------GPRGLPGHEGAE 449
PG PK + R PG PGP+ GPRG PG GA+
Sbjct: 205 PGRPGPKGPKDTCPRCPPGPPGPKGKRGETGPRGRPGEPGAD 246
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G G G GP GP+G PG G
Sbjct: 301 ESGAAGDLGPDGPPGPKGAPGAPG 324
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPG 434
G+RG G GP G +GLPG
Sbjct: 69 GSRGDTGDLGPPGAKGLPG 87
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRG 425
G+ G PG PGP GP G
Sbjct: 1438 GDDGVPGQPGPPGPPG 1453
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E+G G G+PG +G G G +G
Sbjct: 257 ERGETGLDGAPGKKGEDGTKGEQG 280
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
PG P E G G PG G G RG G+ G
Sbjct: 506 PGISRPGPPGENGAFGLPGRKGDSGDRGPDGNPG 539
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G G PG PGP G GL G G
Sbjct: 931 RGPPGEPGPPGPFGAAGLDGMPG 953
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
+ G RG G PG QG RG PG+EGA
Sbjct: 157 QTGPRGPTGPPGLQGVRGAPGNEGA 181
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G+RG PG+ GPQGP G G +G
Sbjct: 198 GSRGSPGNQGPQGPSGPQGSKG 219
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGP---QGPRGLPGHEG 443
+P + GN G PG GP QGP+G PG +G
Sbjct: 418 MPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQG 450
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG RG PG PG G +G PG G
Sbjct: 803 KGERGSPGEPGKAGKQGPPGPSG 825
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G +G G+PGP+G GLPG G++
Sbjct: 84 GIKGSNGAPGPRGSPGLPGPRGSD 107
Score = 31.5 bits (68), Expect = 0.51
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 339 APGCCV-PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
APG P G+RG GSPGP+G G PG G
Sbjct: 256 APGITGNPGATGINGDRGPNGSPGPRGAPGPPGKRG 291
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G G+PG QGP GLPG G
Sbjct: 438 GPQGPQGAPGTQGPPGLPGKTG 459
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+KGNRG G G QGP G+ G +G
Sbjct: 865 DKGNRGPRGEKGEQGPPGVAGTDG 888
Score = 31.1 bits (67), Expect = 0.67
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
+G RG PG+PG +G RG G G+
Sbjct: 179 EGARGLPGNPGLKGKRGATGSRGS 202
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGP GP G PG G
Sbjct: 657 GMSGPPGRPGPPGPPGPPGPSG 678
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+ GN+G G PGPQG +G G G
Sbjct: 41 QPGNQGMRGDPGPQGDQGPQGPPG 64
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G G+PG +G RGLPG+ G
Sbjct: 168 GLQGVRGAPGNEGARGLPGNPG 189
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
P ++G G GSPG QGP+G G +G++
Sbjct: 188 PGLKGKRGATGSRGSPGNQGPQGPSGPQGSK 218
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGA 446
+P E+G+ G PG G QGP G G GA
Sbjct: 799 IPGLKGERGSPGEPGKAGKQGPPGPSGPLGA 829
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 339 APGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
APG P +G G G GP+GP G PG +G
Sbjct: 139 APGA--PGSPGAEGKVGLTGQTGPRGPTGPPGLQG 171
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G+ G G PGPQGP G G G
Sbjct: 564 GSDGLNGPPGPQGPAGEKGEAG 585
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P ++G G G PGP G G PG++G
Sbjct: 18 PGDIGDQGPSGEAGKPGPLGYNGQPGNQG 46
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
+P G G PG PGP GP G G G
Sbjct: 655 MPGMSGPPGRPGPPGPPGPPGPSGPSGSNG 684
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG PGP GP G G G +
Sbjct: 666 GPPGPPGPPGPSGPSGSNGRNGVK 689
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
E G G G PGP GP G G G +
Sbjct: 811 EPGKAGKQGPPGPSGPLGANGEPGVQ 836
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G +G PG GP G G PG +GA+
Sbjct: 816 GKQGPPGPSGPLGANGEPGVQGAK 839
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
+ G++G G GP GPRG G +GA+
Sbjct: 595 KNGDQGASGPTGPVGPRGPGGIKGAK 620
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEGA 446
P E+G +G G G GP G PG G+
Sbjct: 473 PGAMGERGPQGETGPTGLTGPTGKPGDRGS 502
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G G PG PGP GP G G G+
Sbjct: 660 GPPGRPGPPGPPGPPGPSGPSGS 682
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG G G PG GP G PG G
Sbjct: 689 KGTPGRDGEPGIPGPDGRPGERG 711
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +3
Query: 378 GNRGFPGSPGP---QGPRGLPGHEG 443
G RG PG PGP GPRG G G
Sbjct: 93 GPRGSPGLPGPRGSDGPRGQRGEVG 117
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG PG G G PG GAE
Sbjct: 126 GMVGRPGRPGFDGAPGAPGSPGAE 149
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PGSPG +G GL G G
Sbjct: 138 GAPGAPGSPGAEGKVGLTGQTG 159
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G++G G PGP G G+ G GA
Sbjct: 234 GDKGAMGGPGPAGQPGIRGPSGA 256
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P +G RG G PG G G PG +G
Sbjct: 539 PGAKGSRGERGRVGPPGIDGKDGAPGSDG 567
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Frame = +3
Query: 375 KGNRGFPGS---PGPQGPRGLPGHEG 443
KG G PGS PG GP G PG G
Sbjct: 644 KGGEGTPGSQGMPGMSGPPGRPGPPG 669
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+ G +GP G PG G
Sbjct: 735 GRAGEPGAVGLRGPTGQPGENG 756
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +3
Query: 375 KGNRGFPG---SPGPQGPRGLPGHEG 443
KG+ G PG SPG GPRG G G
Sbjct: 86 KGSNGAPGPRGSPGLPGPRGSDGPRG 111
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G+RG PG G G G PG G
Sbjct: 414 GSRGMPGVAGKNGNAGEPGERG 435
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G++G PG GP G G PG G
Sbjct: 651 GSQGMPGMSGPPGRPGPPGPPG 672
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G G+PG G G+PG +G
Sbjct: 684 GRNGVKGTPGRDGEPGIPGPDG 705
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G G GP G RG PG +G
Sbjct: 714 GEIGRKGEKGPSGERGYPGKDG 735
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 33.9 bits (74), Expect = 0.096
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
E+G+ G PG G GPRG PG EG+
Sbjct: 16 EQGDAGPPGPEGNMGPRGQPGPEGS 40
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+GN G G PGP+G GLPG G
Sbjct: 26 EGNMGPRGQPGPEGSPGLPGERG 48
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G RG G PGP+G +G PG G
Sbjct: 45 GERGTGGVPGPKGKQGAPGTIG 66
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
+ G G PG PG +G G+PG +G +
Sbjct: 34 QPGPEGSPGLPGERGTGGVPGPKGKQ 59
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G RG PG PG G RG G G
Sbjct: 233 ETGPRGRPGEPGADGVRGPDGSTG 256
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 339 APGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
+PG P G G G GP GP+G PG G +
Sbjct: 108 SPGA--PGIIGMNGAMGKKGDTGPLGPKGQPGSPGID 142
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 342 PGCCVPKC-FAEKGNRGFPGSPGPQGPRGLPGHEG 443
P C +C +KG G G+ G QGP G PG G
Sbjct: 175 PFCPEGECPQPKKGEPGATGNVGDQGPIGPPGRPG 209
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQ------GPRGLPGHEGAE 449
PG PK + R PG PGP+ GPRG PG GA+
Sbjct: 205 PGRPGPKGPKDTCPRCPPGPPGPKGKRGETGPRGRPGEPGAD 246
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPG 434
G+RG G GP G +GLPG
Sbjct: 69 GSRGDTGDLGPPGAKGLPG 87
>SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 376
Score = 33.9 bits (74), Expect = 0.096
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 321 INRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
+ R A G P+ + G+RG PG GPQG +G PG +G +
Sbjct: 195 VQRLSQASGSTGPRGY--NGSRGPPGPSGPQGQQGPPGTKGPQ 235
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G +G PG+ GPQG G GH G
Sbjct: 223 QGQQGPPGTKGPQGFMGPRGHNG 245
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 342 PGCCVPKCF-AEKGNRGFPGSPGPQGPRGLPGHEG 443
PG P+ F +G+ G G GPQGP G G G
Sbjct: 229 PGTKGPQGFMGPRGHNGTAGQQGPQGPPGPKGDTG 263
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP+G GP P P G P PS
Sbjct: 252 PQGPPGPKGDTGPAGPGGPRGNQGPPGPS 280
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 339 APGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEGA 446
APG P +KG++G PG PG G GL G GA
Sbjct: 380 APGS--PGLGGQKGDQGMPGKPGNPGAAGLRGAPGA 413
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRG 425
GN G PGSPGP GP+G
Sbjct: 481 GNAGSPGSPGPSGPKG 496
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
+P ++G+RG PG+ GP G G PG G +
Sbjct: 119 IPGLPGKRGDRGTPGAKGPPGLAGEPGEPGTQ 150
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PG QGPRG PG G
Sbjct: 139 GLAGEPGEPGTQGPRGDPGDVG 160
Score = 32.3 bits (70), Expect = 0.29
Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 4/114 (3%)
Frame = +3
Query: 120 GITYIPGXLPPTNWPREVAPDTERPYAVNQYGLYNRNDIPPQSRPEPELGQNFAVYDPDT 299
G+ PG P T PR D P + G RN + P GQ A+ P
Sbjct: 139 GLAGEPGE-PGTQGPRGDPGDVGEP---GEAGPSGRNGANGTAGPPGVRGQPGAIGSPGD 194
Query: 300 RQRTSTAINRNCTAPGCCVPK-CFAEKGNRGFPGSPGPQGPR---GLPGHEGAE 449
R + A G + E+G +G GS GP GPR G+PG GA+
Sbjct: 195 AGRAGPQGPQG--AEGRTGRRGSLGERGGKGPQGSRGPVGPRGANGVPGSPGAD 246
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+G G PGSPG G G G GA+
Sbjct: 234 RGANGVPGSPGADGDTGEAGEHGAD 258
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 387 GFPGSPGPQGPRGLPGHEG 443
G PG PG +G RG PG +G
Sbjct: 118 GIPGLPGKRGDRGTPGAKG 136
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG GP GP G PG G
Sbjct: 460 GAPGIPGEQGPMGPVGAPGPVG 481
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 366 FAEKGNRGFP---GSPGPQGPRGLPGHEGAE 449
+ E+G G P G+PG QG RG G +G +
Sbjct: 417 YGERGEPGAPGRDGAPGAQGERGPRGEQGKQ 447
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+ G +GPRG G +G
Sbjct: 427 GRDGAPGAQGERGPRGEQGKQG 448
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G G PG PG QGP G G G
Sbjct: 455 EGGADGAPGIPGEQGPMGPVGAPG 478
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E+G G G+PGP G G PG G
Sbjct: 467 EQGPMGPVGAPGPVGNAGSPGSPG 490
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 PGCC-VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGA 446
PG C V C G +G G PG QGP G G +GA
Sbjct: 498 PGLCNVDVCKGTPGIQGPQGLPGKQGPAGPQGRQGA 533
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGL 428
G G G PGPQGP G+
Sbjct: 565 GQNGLQGPPGPQGPMGV 581
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G PG PGP G RG PG G
Sbjct: 243 GPKGTPGDPGPTGSRGRPGKPG 264
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGP GP G PG G
Sbjct: 144 GRDGRPGVPGPIGPIGPPGKIG 165
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PG +G +G PG +G
Sbjct: 162 GKIGLPGIPGMKGDKGDPGKQG 183
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 351 CVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
C+P +G +G G GP+G G+ G +G
Sbjct: 216 CLPGKLGPQGPKGARGITGPKGDAGITGPKG 246
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 526 LPLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
+P P GP P GP P P P APS P+
Sbjct: 357 VPSDPTGPSDPTGPSDPTAPSDPTAPSDPT 386
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P +P P GP P P P GP P+APS
Sbjct: 319 PTAPSDPTGPSDPTGPSDPTGPSDPTAPS 347
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P APS P+
Sbjct: 328 PSDPTGPSDPTGPSDPTAPSDPTAPSDPT 356
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P GP P P P GP P+APS
Sbjct: 205 PTGPSDPTGPSDPTGPSDPTGPSDPTAPS 233
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P GP P P P GP P+APS
Sbjct: 217 PTGPSDPTGPSDPTAPSDPTGPSDPTAPS 245
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 526 LPLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
L P GP P GP P P GP P+ PS
Sbjct: 96 LSSDPTGPSDPTGPTAPSDPTGPSDPTVPS 125
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P P GP P P GP P+ PS
Sbjct: 136 PSDPTAPSDPTGPSDPTAPTGPSDPTGPS 164
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P P GP P P GP P+ PS
Sbjct: 181 PSDPTAPSDPTGPSDPTAPTGPSDPTGPS 209
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P +P P GP P P P GP P+APS
Sbjct: 499 PTAPSDPTGPNDPTVPSDPTGPSDPTAPS 527
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P APS P+
Sbjct: 208 PSDPTGPSDPTGPSDPTGPSDPTAPSDPT 236
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P APS P+
Sbjct: 322 PSDPTGPSDPTGPSDPTGPSDPTAPSDPT 350
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P GP P P P GP P+APS
Sbjct: 511 PTVPSDPTGPSDPTAPSDPTGPSDPTAPS 539
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P GP P P P GP P+AP+
Sbjct: 172 PTGPSDPTGPSDPTAPSDPTGPSDPTAPT 200
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P P P P GP P+ PS
Sbjct: 187 PSDPTGPSDPTAPTGPSDPTGPSDPTGPS 215
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P GP P P P GP P+ PS
Sbjct: 193 PSDPTAPTGPSDPTGPSDPTGPSDPTGPS 221
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P PS P+
Sbjct: 214 PSDPTGPSDPTGPSDPTAPSDPTGPSDPT 242
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P +P GP P GP P P P PS P+
Sbjct: 196 PTAPTGPSDPTGPSDPTGPSDPTGPSDPT 224
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P GP P P P GP P+ PS
Sbjct: 199 PTGPSDPTGPSDPTGPSDPTGPSDPTGPS 227
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P P GP P P P APS P+
Sbjct: 226 PSDPTAPSDPTGPSDPTAPSDPTAPSDPT 254
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P +P P P P P P GP P+APS
Sbjct: 241 PTAPSDPTAPSDPTVPSDPTGPSDPTAPS 269
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P +P P GP P P P GP P+ PS
Sbjct: 487 PTAPSDPTGPSDPTAPSDPTGPNDPTVPS 515
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P P P P P AP+ PS
Sbjct: 175 PSDPTGPSDPTAPSDPTGPSDPTAPTGPS 203
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P PS P+
Sbjct: 202 PSDPTGPSDPTGPSDPTGPSDPTGPSDPT 230
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P GP P P P P P+APS
Sbjct: 325 PTGPSDPTGPSDPTGPSDPTAPSDPTAPS 353
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P P P P P GP P+APS
Sbjct: 427 PTGPSDPTAPSDPTVPSDPTGPSDPTAPS 455
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P +P P GP P P P G P+APS
Sbjct: 109 PTAPSDPTGPSDPTVPSDPTGQSDPTAPS 137
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P +P P GP P P P GP P+ P
Sbjct: 271 PTAPSDPTGPSDPTVPSDPTGPSDPTGP 298
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P +P P G P P P GP P+APS
Sbjct: 409 PTAPSDPTGQSDPTGPSDPTGPSDPTAPS 437
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 526 LPLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
+P P GP P P P P P APS P+
Sbjct: 513 VPSDPTGPSDPTAPSDPTGPSDPTAPSDPT 542
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP GP P P GP P+ P+
Sbjct: 82 PSDPTGPTGPSDPTLSSDPTGPSDPTGPT 110
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P P P P P APS P+
Sbjct: 220 PSDPTGPSDPTAPSDPTGPSDPTAPSDPT 248
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P P GP P P P APS P+
Sbjct: 250 PSDPTVPSDPTGPSDPTAPSDPTAPSDPT 278
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P +P P P P P P GP P+APS
Sbjct: 349 PTAPSDPTVPSDPTGPSDPTGPSDPTAPS 377
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P GP P P P P P+APS
Sbjct: 355 PTVPSDPTGPSDPTGPSDPTAPSDPTAPS 383
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 514 PLGPRGPCGPI*PFCPLGPCAPSAPS 437
P GP P GP P P P PS P+
Sbjct: 421 PTGPSDPTGPSDPTAPSDPTVPSDPT 446
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P P GP P P P APS P+
Sbjct: 436 PSDPTVPSDPTGPSDPTAPSDPTAPSDPT 464
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P P P P P APS P+
Sbjct: 10 PSDPTGPSDPTVPSDPTVPSDPTAPSDPT 38
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFC---PLGPCAPSAPS 437
P +P GP P GP P P GP P+ PS
Sbjct: 151 PTAPTGPSDPTGPSDPTVSSDPTGPSDPTGPS 182
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 514 PLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P GP P P P APS P+
Sbjct: 43 PTAPSDPTGPSDPTAPSDPTAPSDPT 68
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P G P GP P P P APS P+
Sbjct: 412 PSDPTGQSDPTGPSDPTGPSDPTAPSDPT 440
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P P P P P APS P+
Sbjct: 502 PSDPTGPNDPTVPSDPTGPSDPTAPSDPT 530
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P +P P GP GP P P PS P+
Sbjct: 79 PTAPSDPTGPTGPSDPTLSSDPTGPSDPT 107
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P P P P GP P+ S
Sbjct: 142 PSDPTGPSDPTAPTGPSDPTGPSDPTVSS 170
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P P P GP P P P APS P+
Sbjct: 352 PSDPTVPSDPTGPSDPTGPSDPTAPSDPT 380
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
P +GN+G+ G+PG G GL G GA+
Sbjct: 18 PGAIGPQGNKGYAGNPGTLGLEGLRGRTGAQ 48
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+KG G PGSPGPQG G G G
Sbjct: 113 DKGVDGPPGSPGPQGFNGARGPNG 136
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG+ G PG G QGP G PG G
Sbjct: 138 KGDSGRPGQDGRQGPPGPPGARG 160
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
EKG RG PG G QG RG G G+
Sbjct: 80 EKGYRGAPGRQGLQGKRGPEGDPGS 104
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G G PG+ GPQG +G G+ G
Sbjct: 11 EPGRDGTPGAIGPQGNKGYAGNPG 34
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G++G G PG GP+G G G
Sbjct: 110 EAGDKGVDGPPGSPGPQGFNGARG 133
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G +GF G+ GP GP+G G G +
Sbjct: 124 GPQGFNGARGPNGPKGDSGRPGQD 147
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHE 440
G G G PGP G RG PG +
Sbjct: 145 GQDGRQGPPGPPGARGEPGQQ 165
>SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +3
Query: 309 TSTAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
T T IN A V K G RGF GS GP+G +G+ G G +
Sbjct: 802 TVTNINSTLYAKIDAVSKMEGPMGPRGFNGSQGPKGDQGVQGPIGPQ 848
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHE 440
G G PG PGPQGP G PG E
Sbjct: 151 GLPGAPGLPGPQGPMGPPGPE 171
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P E G G PG+PGP G G PG G
Sbjct: 108 PGHVGEDGAPGAPGAPGPPGSPGAPGLPG 136
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 366 FAEKGNRGFPGSPGPQGPRGLPGHEG 443
F KG G PG PG GP G PG G
Sbjct: 75 FFLKGLNGPPGPPGAPGPPGEPGQVG 100
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PG G GLPG +G
Sbjct: 118 GAPGAPGPPGSPGAPGLPGEKG 139
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 339 APGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
+PG P EKG+ G G+PG G G PG G +
Sbjct: 128 SPGA--PGLPGEKGDPGLQGAPGAAGLPGAPGLPGPQ 162
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G G PG+PG G +G PG +GA
Sbjct: 124 GPPGSPGAPGLPGEKGDPGLQGA 146
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG+PG GP+G G G E
Sbjct: 148 GAAGLPGAPGLPGPQGPMGPPGPE 171
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG G GP G PGH G +
Sbjct: 91 GPPGEPGQVGMAGPPGPPGHVGED 114
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 339 APGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
APG +P + G +G PG+ G G GLPG +G
Sbjct: 131 APG--LPGEKGDPGLQGAPGAAGLPGAPGLPGPQG 163
>SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035)
Length = 453
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G G G PGPQGP+GL G GA
Sbjct: 235 GMNGSKGVPGPQGPQGLEGPPGA 257
>SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12)
Length = 299
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
KG++G PG G +GP G PG GA+
Sbjct: 145 KGDKGRPGKRGRRGPAGPPGQPGAD 169
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
+KG G G GP GP G PG +G +
Sbjct: 147 DKGRPGKRGRRGPAGPPGQPGADGKQ 172
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G G G PGP+G +G PG G
Sbjct: 133 QGPPGNQGPPGPKGDKGRPGKRG 155
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
KG+ G G PGP+GP+G G GA+
Sbjct: 118 KGDTGPQGQPGPEGPQGPAGPSGAD 142
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+ G+ G GSPGP GP G G +G
Sbjct: 63 DSGSPGAVGSPGPMGPEGPKGDKG 86
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
+ G +G PG GPQGP G G +G +
Sbjct: 120 DTGPQGQPGPEGPQGPAGPSGADGPQ 145
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G G PG GP+GP+G G G+
Sbjct: 44 GLNGTPGKDGPEGPQGPKGDSGS 66
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +3
Query: 372 EKGNRGFPG---SPGPQGPRGLPGHEGAE 449
+KG+ G PG PGPQG +G G +G +
Sbjct: 87 DKGDTGAPGIDGQPGPQGEKGETGPQGEQ 115
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQ---GPRGLPGHEGAE 449
EKG G G GP+ GP+G PG EG +
Sbjct: 105 EKGETGPQGEQGPKGDTGPQGQPGPEGPQ 133
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G G G GPQGP+G G GA
Sbjct: 47 GTPGKDGPEGPQGPKGDSGSPGA 69
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG GP+GP+G G +G
Sbjct: 68 GAVGSPGPMGPEGPKGDKGDKG 89
>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
Length = 863
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 360 KCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
K G +G G GP GPRGLPG +G +
Sbjct: 482 KSHGAAGPKGDRGPAGPPGPRGLPGAQGPQ 511
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPG 434
G RG PG+ GPQG +G PG
Sbjct: 500 GPRGLPGAQGPQGIQGTPG 518
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G GFPG GP GP+G PG G
Sbjct: 49 GPPGFPGPQGPNGPKGPPGLPG 70
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEGA 446
P + G G PG PGPQ P G PG GA
Sbjct: 358 PGPLGDVGPPGLPGPPGPQMPPGPPGLPGA 387
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEGA 446
P + G G PG PGPQ P G PG GA
Sbjct: 443 PGPLGDVGPPGLPGPPGPQMPPGPPGLPGA 472
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEGA 446
P + G G PG PGPQ P G PG GA
Sbjct: 528 PGPLGDVGPPGLPGPPGPQMPPGPPGLPGA 557
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
+ G G PG PGPQ P G PG GA
Sbjct: 278 DMGPPGLPGPPGPQMPPGPPGLPGA 302
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG PG GP GLPG +G +
Sbjct: 183 GPLGPPGPPGDMGPPGLPGPQGPQ 206
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPS 446
P P GP+GP GP P P G C P+
Sbjct: 809 PPGPPGPKGPPGPNGPLGPPGECGPA 834
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 393 PGSPGPQGPRGLPGHEG 443
PG PGP GP G PG +G
Sbjct: 42 PGPPGPDGPPGFPGPQG 58
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G+ G PG PGPQGP+ PG G
Sbjct: 192 GDMGPPGLPGPQGPQMPPGPPG 213
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+GN G P GPQGP GLPG G
Sbjct: 248 QGNHGNPA--GPQGPNGLPGPNG 268
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPS 446
P P GP GP GP P P G C P+
Sbjct: 724 PPGPPGPNGPPGPNGPLGPPGECGPA 749
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
E G+ G PG PGP GP+ PG G
Sbjct: 105 ELGDMGPPGPPGPPGPQMPPGPPG 128
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+PGP GP G+ G G
Sbjct: 465 GPPGLPGAPGPNGPPGINGPLG 486
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+PGP GP G+ G G
Sbjct: 550 GPPGLPGAPGPNGPPGINGPLG 571
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 393 PGSPGPQGPRGLPGHEG 443
PG PGP GP+G PG G
Sbjct: 637 PGPPGPPGPKGPPGPNG 653
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 393 PGSPGPQGPRGLPGHEG 443
PG PGP GP+G PG G
Sbjct: 807 PGPPGPPGPKGPPGPNG 823
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 393 PGSPGPQGPRGLPGHEG 443
PG PGP GP+G PG G
Sbjct: 892 PGPPGPPGPKGPPGPNG 908
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQ---GPRGLPGHEG 443
P + G G PG PGPQ GP GLPG G
Sbjct: 103 PGELGDMGPPGPPGPPGPQMPPGPPGLPGPPG 134
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG PG GP GLPG G +
Sbjct: 268 GILGPPGPPGDMGPPGLPGPPGPQ 291
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGPQGP G G G
Sbjct: 46 GPDGPPGFPGPQGPNGPKGPPG 67
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGH 437
KG G PG PGP G +G PG+
Sbjct: 63 KGPPGLPGPPGPPGFQGPPGN 83
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 387 GFPGSPGPQGPRGLPGHEG 443
G PG PGP GP G PG G
Sbjct: 125 GPPGLPGPPGPAGPPGTNG 143
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+PGP+GP G G G
Sbjct: 210 GPPGLPGAPGPKGPPGTNGPLG 231
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+PGP+GP G G G
Sbjct: 295 GPPGLPGAPGPKGPPGTNGPLG 316
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+PGP+GP G G G
Sbjct: 380 GPPGLPGAPGPKGPPGTNGPLG 401
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 393 PGSPGPQGPRGLPGHEG 443
PG PGP GP G PG G
Sbjct: 722 PGPPGPPGPNGPPGPNG 738
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G PG PGP GP G G G
Sbjct: 61 GPKGPPGLPGPPGPPGFQGPPG 82
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P E G G PG PGP P PG G
Sbjct: 698 PGQIGEMGPPGLPGPPGPASPPSPPGPPG 726
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PGP GP G G G
Sbjct: 125 GPPGLPGPPGPAGPPGTNGELG 146
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G G PG GP GP G PG G
Sbjct: 173 QGPNGLPGPNGPLGPPGPPGDMG 195
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
+ G G PG GPQ P G PG GA
Sbjct: 193 DMGPPGLPGPQGPQMPPGPPGLPGA 217
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G+ G PG PGP GP+ PG G
Sbjct: 277 GDMGPPGLPGPPGPQMPPGPPG 298
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P E G G PG PGP P PG G
Sbjct: 783 PGQVGEMGPPGLPGPPGPASPPSPPGPPG 811
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P E G G PG PGP P PG G
Sbjct: 868 PGQVGEMGPPGLPGPPGPASPPSPPGPPG 896
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+GN G P GPQGP G PG G
Sbjct: 333 QGNHGNPA--GPQGPNGQPGPPG 353
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+GN G P GPQGP G PG G
Sbjct: 418 QGNHGNPA--GPQGPNGQPGPPG 438
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+GN G P GPQGP G PG G
Sbjct: 503 QGNHGNPA--GPQGPNGQPGPPG 523
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 357 PKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
P E G G PG PGP P PG G
Sbjct: 613 PGEIGEIGPAGLPGPPGPASPPSPPGPPG 641
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G G PGP GP G PG G
Sbjct: 641 GPPGPKGPPGPNGPLGPPGESG 662
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G G PGP GP G PG G
Sbjct: 171 GIQGPNGLPGPNGPLGPPGPPG 192
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG G GP GLPG G
Sbjct: 778 GINGPPGQVGEMGPPGLPGPPG 799
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG G GP GLPG G
Sbjct: 863 GINGPPGQVGEMGPPGLPGPPG 884
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
V K G RG+ GS GPQG G GH G +
Sbjct: 414 VSKMEGPMGPRGYNGSIGPQGLAGAEGHNGTQ 445
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 384 RGFPGSPGPQGPRGLPGHEG 443
R PG PG GPRGLPG+ G
Sbjct: 79 RSPPGPPGIPGPRGLPGYRG 98
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 384 RGFPGSPGPQGPRGLPGHEG 443
RG G PGPQG +G PG +G
Sbjct: 44 RGTEGPPGPQGTKGPPGSQG 63
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGS---PGPQGPRGLPGHEG 443
PG P+ + G G PG PG +GP+G PG++G
Sbjct: 71 PGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGPPGYQG 107
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +3
Query: 378 GNRGFPGSPGPQGP---RGLPGHEGA 446
G RG PG GP+GP +G+PG GA
Sbjct: 89 GPRGLPGYRGPKGPPGYQGMPGIAGA 114
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
PG PK G +G PG G GPRG PG G
Sbjct: 94 PGYRGPK--GPPGYQGMPGIAGAPGPRGPPGPMG 125
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG GP GP G PG G
Sbjct: 110 GIAGAPGPRGPPGPMGPPGPHG 131
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 318 AINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
A+N N PG P+ E+G +G PG G QGP+G G +G
Sbjct: 456 AVN-NSRIPGPRGPQ--GEQGLKGDPGPQGQQGPKGDQGEQG 494
Score = 31.1 bits (67), Expect = 0.67
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
+P +G +G G PGPQG +G G +G +
Sbjct: 462 IPGPRGPQGEQGLKGDPGPQGQQGPKGDQGEQ 493
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G +G GS GPQGP G G G
Sbjct: 489 DQGEQGPKGSQGPQGPIGALGPRG 512
>SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015)
Length = 391
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G G+PG PG +GP G PG G
Sbjct: 80 RGPPGYPGIPGQKGPTGPPGEYG 102
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRG 425
G GFPG GP GP+G
Sbjct: 112 GQSGFPGLHGPPGPKG 127
>SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G RG G PG GPRG+ G EG
Sbjct: 67 GRRGPVGPPGVPGPRGMQGEEG 88
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 387 GFPGSPGPQGPRGLPGHEGAE 449
G PG GP GP G+PG G +
Sbjct: 64 GGPGRRGPVGPPGVPGPRGMQ 84
>SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07)
Length = 232
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+PGP+GP G G G
Sbjct: 59 GRNGKPGAPGPKGPPGPKGSRG 80
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +3
Query: 339 APGCCVPKCF-AEKGNRGFPGSPGPQGPRGLPGHEG 443
AP C C G G PG PG G G PG G
Sbjct: 21 APSPCQNCCAQGHDGKNGIPGDPGVPGQLGTPGKSG 56
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
+ GN G G PG GP+G PG +G+
Sbjct: 54 KSGNDGRNGKPGAPGPKGPPGPKGS 78
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG GP GP+G G +G +
Sbjct: 62 GKPGAPGPKGPPGPKGSRGPKGVQ 85
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+PGP+GP G G G
Sbjct: 59 GRNGKPGAPGPKGPPGPKGSRG 80
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
+ GN G G PG GP+G PG +G+
Sbjct: 54 KSGNDGRNGKPGAPGPKGPPGPKGS 78
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG GP GP+G G +G +
Sbjct: 62 GKPGAPGPKGPPGPKGSRGPKGVQ 85
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 348 CCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
CC + G G PG PG G G G++G
Sbjct: 28 CCAQGHDGKNGIPGIPGVPGKPGTPGKSGNDG 59
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG+PGP+GP G G G
Sbjct: 59 GRNGKPGAPGPKGPPGPKGSRG 80
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
+ GN G G PG GP+G PG +G+
Sbjct: 54 KSGNDGRNGKPGAPGPKGPPGPKGS 78
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +3
Query: 339 APGCCVPKCF-AEKGNRGFPGSPGPQGPRGLPGHEG 443
AP C C G G PG PG G G PG G
Sbjct: 21 APSPCQNCCAQGHDGKNGIPGIPGVHGKPGTPGKSG 56
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG GP GP+G G +G +
Sbjct: 62 GKPGAPGPKGPPGPKGSRGPKGVQ 85
>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 526 LPLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
+P P P GP P P P GP PS P+
Sbjct: 463 VPAGPTVPSGPAVPTGPTVPSGPTVPSGPT 492
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 526 LPLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
+P P P GP P P P GP PS P+
Sbjct: 457 VPSDPTVPAGPTVPSGPAVPTGPTVPSGPT 486
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 526 LPLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
+P P P GP P P P GP PS P+
Sbjct: 475 VPTGPTVPSGPTVPSGPTVPSGPTVPSGPT 504
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 526 LPLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
+P P P GP P P P GP PS P+
Sbjct: 469 VPSGPAVPTGPTVPSGPTVPSGPTVPSGPT 498
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 526 LPLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
+P P P GP P P P GP PS P+
Sbjct: 481 VPSGPTVPSGPTVPSGPTVPSGPTVPSGPT 510
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 526 LPLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
+P P P GP P P P GP PS P+
Sbjct: 487 VPSGPTVPSGPTVPSGPTVPSGPTVPSGPT 516
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 526 LPLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
+P P P GP P P P GP PS P+
Sbjct: 493 VPSGPTVPSGPTVPSGPTVPSGPTVPSGPT 522
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P P+ PS
Sbjct: 461 PTVPAGPTVPSGPAVPTGPTVPSGPTVPS 489
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P P+ PS
Sbjct: 473 PAVPTGPTVPSGPTVPSGPTVPSGPTVPS 501
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P P+ PS
Sbjct: 467 PTVPSGPAVPTGPTVPSGPTVPSGPTVPS 495
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P P+ PS
Sbjct: 479 PTVPSGPTVPSGPTVPSGPTVPSGPTVPS 507
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P P+ PS
Sbjct: 485 PTVPSGPTVPSGPTVPSGPTVPSGPTVPS 513
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P P+ PS
Sbjct: 491 PTVPSGPTVPSGPTVPSGPTVPSGPTVPS 519
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP P GP P P P P+ PS
Sbjct: 497 PTVPSGPTVPSGPTVPSGPTVPSGPTVPS 525
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGA 446
VP C +G +G PG G G GLPG +GA
Sbjct: 119 VPLC--PQGPQGLPGRDGLPGKAGLPGRDGA 147
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G+ G PG PGP G RG G G
Sbjct: 260 DRGDMGPPGHPGPPGVRGRRGKRG 283
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+KG+RG G PG GP G+ G G
Sbjct: 257 QKGDRGDMGPPGHPGPPGVRGRRG 280
>SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G G PG GP G+PG +G
Sbjct: 134 GRNGLDGRPGMDGPMGMPGRDG 155
Score = 31.1 bits (67), Expect = 0.67
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+KG +G PG G +GP GL G G
Sbjct: 195 DKGVQGLPGPKGDRGPTGLSGENG 218
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G+ G PG+PGP G GL G +G
Sbjct: 159 KEGSPGPPGAPGPPGVNGLQGLQG 182
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PG PG GP G+ G +G +
Sbjct: 158 GKEGSPGPPGAPGPPGVNGLQGLQ 181
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G GSPGP G G PG G +
Sbjct: 155 GTNGKEGSPGPPGAPGPPGVNGLQ 178
>SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022)
Length = 94
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 309 TSTAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
T + IN +A V K G RG+ GS GP+G +G+ G G +
Sbjct: 18 TVSDINSTLSAKIDSVSKMEGPMGPRGYNGSQGPKGDQGVQGPIGPQ 64
>SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12)
Length = 567
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 351 CVPKCFAEKGNRGFPGSPGPQGPRGLPGH 437
C+ ++G RG G GPQG RG GH
Sbjct: 209 CIQGPKGDRGRRGPRGRQGPQGKRGPKGH 237
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPG 434
E+G +G PG GP GP+G PG
Sbjct: 255 ERGPQGPPGPKGPIGPKGEPG 275
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G RG G PGP+GP G G G
Sbjct: 252 DRGERGPQGPPGPKGPIGPKGEPG 275
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
+KG+RG G GP GP+G G +G
Sbjct: 249 QKGDRGERGPQGPPGPKGPIGPKG 272
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +3
Query: 327 RNCTAPGCCVPK---CF-AEKGNRGFPGSPGPQGPRGLPGHEG 443
+N G CV C KG+RG G G QGP+G G +G
Sbjct: 194 QNILKTGVCVKNRKMCIQGPKGDRGRRGPRGRQGPQGKRGPKG 236
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP+G G P P GP P P+
Sbjct: 194 PAGPTGPKGDTGATGPTDPTGPTGPKGPT 222
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P P GP+GP GP GP P+ P
Sbjct: 212 PTGPTGPKGPTGPKGEIGATGPTDPTGP 239
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P P GP GP G P GP P+ P
Sbjct: 173 PAGPTGPTGPKGDTGATGPAGPAGPTGP 200
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P GP GP GP P +G P+ P+
Sbjct: 209 PTDPTGPTGPKGPTGPKGEIGATGPTDPT 237
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P P GP GP G P GP P+ P
Sbjct: 278 PAGPTGPTGPKGDTGATGPAGPTGPTGP 305
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P P G G GP P P GP P+ P
Sbjct: 197 PTGPKGDTGATGPTDPTGPTGPKGPTGP 224
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAP 449
P P GP+G G P P GP P
Sbjct: 158 PTGPTGPKGDTGATGPAGPTGPTGP 182
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
KG+ G G GP GP G G GA
Sbjct: 165 KGDTGATGPAGPTGPTGPKGDTGA 188
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
KG+ G G GP GP G G GA
Sbjct: 183 KGDTGATGPAGPAGPTGPKGDTGA 206
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAP 449
P P GP+G G P P GP P
Sbjct: 233 PTDPTGPKGDTGATGPTGPTGPTGP 257
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
KG+ G G GP GP G G GA
Sbjct: 240 KGDTGATGPTGPTGPTGPKGDTGA 263
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
KG+ G G GP GP G G GA
Sbjct: 270 KGDTGATGPAGPTGPTGPKGDTGA 293
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
KG+ G G GP GP G G GA
Sbjct: 288 KGDTGATGPAGPTGPTGPKGDTGA 311
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G+ G PG G G +GLPG GA+
Sbjct: 318 GSNGQPGRQGEPGKQGLPGESGAQ 341
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
KG G PG+ GP G G+ G +GA
Sbjct: 129 KGGLGEPGTDGPPGDAGMQGSDGA 152
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G+RG G G QGP G PG G
Sbjct: 288 GDRGAQGKTGKQGPTGTPGTVG 309
>SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048)
Length = 763
Score = 30.7 bits (66), Expect = 0.89
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 393 PGSPGPQGPRGLPGHEG 443
PG GP GP+GLPG +G
Sbjct: 176 PGPQGPPGPQGLPGPQG 192
>SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09)
Length = 234
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
EKG RG G GP GP+G G +G
Sbjct: 35 EKGYRGELGKVGPSGPQGRKGFKG 58
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+G +GF G PGP GLPG +G +
Sbjct: 51 QGRKGFKGEPGPP---GLPGEQGPQ 72
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRG 425
KG G PG PG QGP+G
Sbjct: 57 KGEPGPPGLPGEQGPQG 73
>SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
EKG++G PG G GP+G G G
Sbjct: 138 EKGDQGIPGVKGDVGPKGEKGDSG 161
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +3
Query: 219 YNRNDIPPQSRPEPELGQNFAVYDP----DT-RQRTSTAINRNCTAPGCCVPKCFAEKGN 383
Y+R+ + +SRP G V DT RT +A R+ A G F K
Sbjct: 64 YSRSSLSDRSRPAGLKGDPGPVGPKGDKGDTVSARTISATLRDNFALGTVRDNFFILKVT 123
Query: 384 RGFPGSPGPQGPRGLPGHEG 443
+G G PG +GP G G +G
Sbjct: 124 QGSQGPPGKRGPPGEKGDQG 143
>SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2499
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAP 449
PLSPL P P P PLGPC P
Sbjct: 985 PLSPLTPGAPDAPGGHRLPLGPCKP 1009
>SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29)
Length = 407
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG+RG G GP GP G G +G
Sbjct: 57 KGSRGIAGEAGPDGPAGPAGLDG 79
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G +G G PGP GP+G G G
Sbjct: 356 RGTKGEAGPPGPNGPKGNVGPAG 378
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G +G G PGP+G RG+ G G +
Sbjct: 46 GLQGQRGPPGPKGSRGIAGEAGPD 69
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G PG G QGP GL G G
Sbjct: 31 GAQGAPGEGGLQGPIGLQGQRG 52
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 393 PGSPGPQGPRGLPGHEGAE 449
PG GP GP GL G +G +
Sbjct: 317 PGEMGPDGPAGLAGSQGEQ 335
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G+RG G GP GP G G+ G
Sbjct: 354 GSRGTKGEAGPPGPNGPKGNVG 375
>SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09)
Length = 386
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 309 TSTAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
T + IN +A V K G RG+ GS GP+G +G+ G G +
Sbjct: 274 TVSDINSTLSAKIDSVSKMEGPIGPRGYNGSQGPKGDQGVQGPIGPQ 320
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPG 434
+G +G G PGPQGP+G G
Sbjct: 335 QGVKGDQGVPGPQGPKGAQG 354
>SB_20784| Best HMM Match : Collagen (HMM E-Value=0.0036)
Length = 60
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPG 434
G RG PG G QGPRG PG
Sbjct: 2 GARGPPGVTGAQGPRGPPG 20
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGS---PGPQGPRGLPGHEG 443
VP G+ G PG+ PGP+GP G PG+ G
Sbjct: 1050 VPGPVGPDGDIGAPGADGVPGPKGPPGPPGYPG 1082
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG GP GP G PG +G
Sbjct: 1064 GADGVPGPKGPPGPPGYPGFKG 1085
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G G PG GP G G PG +G
Sbjct: 1044 DRGQTGVPGPVGPDGDIGAPGADG 1067
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G G PGSPG +G G+PG G +
Sbjct: 1034 GPPGPPGSPGDRGQTGVPGPVGPD 1057
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGAE 449
G+RG G PGP GP G G GA+
Sbjct: 1043 GDRGQTGVPGPVGPDGDIGAPGAD 1066
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 339 APGCC-VPKCFAEKGNRGFPGSPGPQGPRGLPGHEG 443
APG VP G G+PG G +GP+G PG G
Sbjct: 1062 APGADGVPGPKGPPGPPGYPGFKGYRGPQGPPGIAG 1097
>SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G +G G PGP GP G PG G
Sbjct: 13 GEKGSRGPPGPAGPIGNPGKPG 34
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPG 434
EKG+RG PG GP G G PG
Sbjct: 14 EKGSRGPPGPAGPIGNPGKPG 34
>SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45)
Length = 577
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
KG G PG G GP G G EG+E
Sbjct: 52 KGPPGVPGEVGKPGPIGYQGREGSE 76
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGA 446
++G G G GP GP G PG +G+
Sbjct: 234 KQGGVGPTGGHGPPGPMGEPGRKGS 258
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G+RG G PG GPRG G +G
Sbjct: 186 GDRGPQGIPGDMGPRGAKGDKG 207
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 327 RNCTAPGC--CVPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
R C+ P CV +G RG+ G GPQG G G GA+
Sbjct: 161 RVCSTPEGKKCVQGPQGLRGPRGYSGDRGPQGIPGDMGPRGAK 203
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEG 443
++G +G PG GP+G +G G G
Sbjct: 187 DRGPQGIPGDMGPRGAKGDKGDRG 210
>SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05)
Length = 510
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 369 AEKGNRGFPGSPGPQGPRGLPGHEGA 446
A+ N G G G QGP+G PG +G+
Sbjct: 6 AQDLNLGVQGPRGEQGPQGAPGRDGS 31
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHE 440
KG RG PG+PG G RG G +
Sbjct: 245 KGERGPPGAPGAAGVRGDRGDD 266
>SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003)
Length = 157
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G +G PG G GPRG+ G EG
Sbjct: 3 QGIQGNPGYQGVPGPRGMQGEEG 25
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+GN G+ G PGP+G +G G G
Sbjct: 6 QGNPGYQGVPGPRGMQGEEGPAG 28
>SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024)
Length = 60
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPG 434
G RG PG GP GP G+ G
Sbjct: 38 GQRGMPGGTGPPGPPGIIG 56
>SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 204
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+G +G G PGP GP+G G GA+
Sbjct: 180 QGIQGMRGPPGPPGPQGSLGPAGAK 204
>SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G G G PG +GP+G PG G
Sbjct: 76 RGRDGRDGKPGLRGPKGAPGGRG 98
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 434
PG PK G RG G+ GP GPRG G
Sbjct: 85 PGLRGPK--GAPGGRGRIGARGPPGPRGSSG 113
>SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 186
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+G +G G PGP GP+G G GA+
Sbjct: 162 QGIQGMRGPPGPPGPQGSLGPAGAK 186
>SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 285 YDPDTRQRTSTAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQ---GPRGLPGHE 440
+ PD T+T T PG P KG G G GP+ GP+G PG++
Sbjct: 445 HGPDILIPTTTETPIVPTVPGPQPPIIVGSKGPDGLRGYRGPKGEPGPKGEPGYK 499
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +3
Query: 378 GNRGFPGSP----GPQGPRGLPGHEGAE 449
G RG PG P GP G GLPG++G E
Sbjct: 11 GIRGDPGIPSVVRGPPGKPGLPGNKGKE 38
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRG 425
G+ G PG PGP GP G
Sbjct: 42 GDDGVPGQPGPPGPPG 57
>SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013)
Length = 496
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 354 VPKCFAEKGNRGFPGSPGPQGPRGLPGHEGAE 449
V K G RG+ GS GP+G +G+ G G +
Sbjct: 360 VSKVEGPMGPRGYNGSQGPKGDQGVQGPVGPQ 391
>SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12)
Length = 104
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P P GP GP G P GP P+ P
Sbjct: 59 PAGPTGPTGPKGDTGATGPAGPTGPTGP 86
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAP 449
P P GP+G G P P GP P
Sbjct: 14 PTDPTGPKGDTGATGPTGPTGPTGP 38
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
KG+ G G GP GP G G GA
Sbjct: 21 KGDTGATGPTGPTGPTGPKGDTGA 44
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
KG+ G G GP GP G G GA
Sbjct: 51 KGDTGATGPAGPTGPTGPKGDTGA 74
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGA 446
KG+ G G GP GP G G GA
Sbjct: 69 KGDTGATGPAGPTGPTGPKGDTGA 92
>SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 315 TAINRNCTAPGCCVPKCFAE-KGNRGFPGSPGPQGPRGLPGHEGAE 449
T + + PG V KC E +G++ PG PG + +PG GAE
Sbjct: 1456 TGVRGDACVPGVRVNKCVPEVRGDQCVPGVPGN---KCVPGVRGAE 1498
>SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 348
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEGA 446
G+RG PG GPQG RG G A
Sbjct: 238 GSRGPPGIQGPQGERGPMGPRAA 260
>SB_58047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 387 GFPGSPGPQGPRGLPG 434
G PG PGP GP G PG
Sbjct: 211 GPPGPPGPPGPPGPPG 226
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 135 PGXLPPTNWPREVAPDTERPYAVNQYGLYNRNDIPPQSRPEPELGQNFAVYDPD----TR 302
PG W EV +R +V + G Y R DI ++ G + V DPD TR
Sbjct: 1129 PGEAALAPWGVEVV---KRDVSVFKLGPYTRKDIEVETDMSVHTGPSGLVEDPDSPSFTR 1185
Query: 303 QRTSTAINRNCT 338
+RT R T
Sbjct: 1186 KRTWKTTTRETT 1197
>SB_28365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = -3
Query: 292 GSYTAKFCPNSGSGLDWGGISFLLYNPY*FTAYGRSVSGATSRGQLVGGKXPGIYVIPIR 113
GSY S SG + + Y P S+SGA + K P ++++PI
Sbjct: 40 GSYNIDM--GSISGANISQYYWCQYQPVLLVPISASISGANNSQYYWCQKQP-VFLVPIS 96
Query: 112 ISIILRAYSDYFRCQ 68
SI S Y+ CQ
Sbjct: 97 ASITGANISQYYWCQ 111
>SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01)
Length = 738
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHEG 443
G G PG PG GP GL G G
Sbjct: 609 GTSGPPGPPGDMGPPGLNGTRG 630
>SB_53235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 20
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 396 GSPGPQGPRGLPGHEG 443
G PGP+G GLPG G
Sbjct: 4 GQPGPEGSPGLPGERG 19
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 523 PLSPLGPRGPCGPI*PFCPLGPCAPSAP 440
P +PL GP PI P+ P P++P
Sbjct: 1650 PTTPLSSSGPSTPISTVAPMTPLTPTSP 1677
>SB_41255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 369 AEKGNRGFPGSPGPQGPRG 425
A G G PG PGPQGP G
Sbjct: 45 AAVGPPGPPGPPGPQGPAG 63
>SB_24707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 921
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -2
Query: 224 IIQPILIYSVWSLRIWRHF--TRPVSRRQXP 138
+I+P++ VW+ ++WR F RP R++ P
Sbjct: 41 LIKPLVPEKVWTEKVWREFDPLRPGRRQEGP 71
>SB_24706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 524
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -2
Query: 224 IIQPILIYSVWSLRIWRHF--TRPVSRRQXP 138
+I+P++ VW+ ++WR F RP R++ P
Sbjct: 41 LIKPLVPEKVWTEKVWREFDPLRPGRRQEGP 71
>SB_23692| Best HMM Match : Ribosomal_S26e (HMM E-Value=3.3)
Length = 572
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -2
Query: 224 IIQPILIYSVWSLRIWRHF--TRPVSRRQXP 138
+I+P++ VW+ ++WR F RP R++ P
Sbjct: 41 LIKPLVPEKVWTEKVWREFDPLRPGRRQEGP 71
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 372 EKGNRGFPGSPGPQGPRGLPGHEGAE 449
++G +G G GPQGP+G G G E
Sbjct: 328 QQGPKGDTGITGPQGPKGDTGITGPE 353
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG+ G G GP+G G+ G EG
Sbjct: 332 KGDTGITGPQGPKGDTGITGPEG 354
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG+ G G GP+G G+ G EG
Sbjct: 344 KGDTGITGPEGPKGDTGITGPEG 366
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG+ G G GP+G G+ G EG
Sbjct: 392 KGDTGITGPQGPKGDTGITGPEG 414
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
KG+ G G GP+G G+ G EG
Sbjct: 404 KGDTGITGPEGPKGDTGITGPEG 426
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G +G G GPQGP+G G++G
Sbjct: 449 QGPKGDTGITGPQGPKGDTGNKG 471
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEGAE 449
+G +G G GPQGP+G G G E
Sbjct: 389 QGPKGDTGITGPQGPKGDTGITGPE 413
>SB_59044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -3
Query: 220 YNPY*FTAYGRSVSGATSRGQLVGGKXPGIYVIPIRISIILRAYSDYFRCQ 68
Y P S+SGA + K P ++++PI SI + YF CQ
Sbjct: 16 YQPVLLVPISASISGANNSQYYWCQKQP-VFLVPITASITGASIRQYFWCQ 65
>SB_54367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 300 VCPDHTQRSF--ALILVPVLIGVVYRFYYTT 214
VCP +T + L LVP L+ V++RFY+TT
Sbjct: 7 VCPLYTGFTVQQTLALVP-LVSVIHRFYFTT 36
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 378 GNRGFPGSPGPQGPRGLPGHE 440
G G PG+PG G GL G E
Sbjct: 151 GGNGLPGNPGDPGRPGLKGEE 171
>SB_48755| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08)
Length = 421
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 505 PRGPCGPI*PFCPLGPC 455
PR PCG + FCP G C
Sbjct: 371 PRPPCGTVERFCPDGRC 387
>SB_33015| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/66 (28%), Positives = 25/66 (37%)
Frame = +3
Query: 150 PTNWPREVAPDTERPYAVNQYGLYNRNDIPPQSRPEPELGQNFAVYDPDTRQRTSTAINR 329
P ++P A DT++P Q R IP + P P L A T TA +
Sbjct: 499 PRDYPCAYAHDTDQPSVPCQRTADQRTPIPLKETPTPALESAPAAMPDATETAWVTAKAK 558
Query: 330 NCTAPG 347
C G
Sbjct: 559 QCAKLG 564
>SB_20539| Best HMM Match : VWA (HMM E-Value=5.1848e-44)
Length = 262
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 114 RIGITYIPGXLPPTNWP-REVAPDTERPYAVNQYGLYNRNDIPPQSRP 254
R+ T P LPP +P R AP T+ P V + R D+PP P
Sbjct: 206 RLPQTQRPPTLPPLTFPPRTFAPLTQPPRPVTR-----RRDVPPTPAP 248
>SB_14932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRG 425
KG G PG PG QGP+G
Sbjct: 3 KGEPGPPGLPGEQGPQG 19
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +3
Query: 375 KGNRGFPGSPG---PQGPRGLPGHEG 443
KG+ G PG PG +GPRG+ G +G
Sbjct: 166 KGDPGPPGPPGIMGRRGPRGIQGRKG 191
>SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 111
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +3
Query: 375 KGNRGFPGSPG---PQGPRGLPGHEG 443
KG+ G PG PG +GPRG+ G +G
Sbjct: 44 KGDPGPPGPPGIMGRRGPRGIQGRKG 69
>SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 303
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 514 PLGPRGPCGPI*PFCPLGPCAPSAPS 437
P P PC P P+ P PC P PS
Sbjct: 206 PPKPDIPCTPDKPYKPDRPCTPDEPS 231
>SB_31101| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 417
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 396 GSPGPQGPRGLPGHEGA 446
G GP+G RGLPG GA
Sbjct: 254 GLQGPKGERGLPGASGA 270
>SB_20408| Best HMM Match : rve (HMM E-Value=0.0034)
Length = 887
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = +3
Query: 165 REVAPDTERPYAVNQYGLYNRNDIPPQSRPEPELGQNFAVYDPDTRQRTSTAINRNCTAP 344
RE+A R AVNQ ND+ P +RP Q T+ R A AP
Sbjct: 450 RELAAAFTRTPAVNQRATEGTNDVTPPARPPLAAAQ-------QTKDRPLAAPATALRAP 502
Query: 345 GCC 353
G C
Sbjct: 503 GQC 505
>SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078)
Length = 102
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +3
Query: 342 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 434
PG PK G RG G+ GP GPRG G
Sbjct: 9 PGLRGPK--GAPGGRGRIGARGPPGPRGSSG 37
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 315 TAINRNCTAPGCCVPKCFAE 374
TA+ R T+ CCVP+C +
Sbjct: 11 TAVRRRTTSFHCCVPRCIGD 30
>SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +3
Query: 135 PGXLPPTNWPREVAPDTERPYAVNQYGL--YNRNDIPPQSRPE 257
PG PP N+P AP P Y + Y D+ P S E
Sbjct: 167 PGFAPPGNYPPPPAPPPAYPPVTQGYNMSQYPPPDVAPPSYDE 209
>SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 375 KGNRGFPGSPGPQGPRGLPGHEG 443
+G RG G GP+GP+G G++G
Sbjct: 202 QGPRGNTGIMGPKGPKGDTGNKG 224
>SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04)
Length = 60
Score = 27.5 bits (58), Expect = 8.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 387 GFPGSPGPQGPRGLPGHEG 443
G G+PGP+G RG+ G +G
Sbjct: 33 GEKGNPGPKGDRGIQGPKG 51
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,000,310
Number of Sequences: 59808
Number of extensions: 390094
Number of successful extensions: 2857
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2641
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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