Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F23
         (459 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   5.5  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    20   9.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 210 AFEADPLGTPRDHMDVLLAQAHG 278
           A++   LGT  D M V+    HG
Sbjct: 816 AYDLPALGTVLDFMSVMTYDYHG 838


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/37 (21%), Positives = 16/37 (43%)
 Frame = +3

Query: 18  LVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESK 128
           L+P P  +    + PG  +  L P  +  +   P ++
Sbjct: 85  LMPSPTVSGSEMSSPGAGSGNLSPQIQTQVARPPPAR 121


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/37 (21%), Positives = 16/37 (43%)
 Frame = +3

Query: 18  LVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESK 128
           L+P P  +    + PG  +  L P  +  +   P ++
Sbjct: 85  LMPSPTVSGSEMSSPGAGSGNLSPQIQTQVARPPPAR 121


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
 Frame = +3

Query: 114  KPESKLAP-LAPYVSPREQTRARVLSTVGQRERAFEADPLGTPR 242
            K E +  P ++P  SPR+       S          +D  GTPR
Sbjct: 904  KEEDEDKPSVSPLTSPRQPAETHAGSPCRNSASPASSDRSGTPR 947


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 138 EAPTSTPVSAGCFV 97
           E+ TSTPVS   F+
Sbjct: 14  ESNTSTPVSKSAFI 27


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 102 NIPPKPESKLAPLAPYVSP 158
           N PP P+    PL P   P
Sbjct: 173 NYPPLPQVPPLPLPPIFPP 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,057
Number of Sequences: 336
Number of extensions: 1334
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)