Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_F23
(459 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-1194|AAF54552.1| 163|Drosophila melanogaster CG6544-PB... 60 2e-09
S72379-1|AAB20671.1| 453|Drosophila melanogaster vestigial prot... 29 3.0
AE013599-1607|AAF58444.1| 453|Drosophila melanogaster CG3830-PA... 29 3.0
Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma pigm... 29 4.0
BT004481-1|AAO42645.1| 771|Drosophila melanogaster LD34250p pro... 29 4.0
AE014298-1948|AAF48305.1| 789|Drosophila melanogaster CG9941-PA... 29 4.0
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 28 5.3
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 28 5.3
BT023819-1|AAZ86740.1| 741|Drosophila melanogaster SD06601p pro... 28 6.9
AY070562-1|AAL48033.1| 716|Drosophila melanogaster LD38760p pro... 28 6.9
AJ606680-1|CAE54809.1| 741|Drosophila melanogaster lamin B rece... 28 6.9
AE013599-3273|AAM71016.1| 716|Drosophila melanogaster CG17952-P... 28 6.9
AE013599-3272|AAF46760.2| 716|Drosophila melanogaster CG17952-P... 28 6.9
AE013599-3271|AAM71015.1| 741|Drosophila melanogaster CG17952-P... 28 6.9
AE014298-3206|ABI30999.1| 517|Drosophila melanogaster CG41474-P... 27 9.2
>AE014297-1194|AAF54552.1| 163|Drosophila melanogaster CG6544-PB,
isoform B protein.
Length = 163
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Frame = +3
Query: 9 RWSLVPDPVTAFGRRTKPGTRA--SVLDPVTKQNIPPKPESKLA--PLAPYVSPREQTRA 176
R SL+ DPVTAFG R R S+LDP+ + +I KP+ KLA P+ PYVS R++ R
Sbjct: 42 RPSLISDPVTAFGVRRPDLERRQRSILDPINRASI--KPDYKLAYEPIEPYVSTRDKNRT 99
Query: 177 RVLSTVGQRERAFEA--DPLG-TPRDHMDVLLAQAH 275
R+L V Q EA + G T RD +D L + H
Sbjct: 100 RILGMVRQHIDTVEAGGNTAGRTFRDSLDAQLPRLH 135
>S72379-1|AAB20671.1| 453|Drosophila melanogaster vestigial
protein.
Length = 453
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 270 AHGRPLHAAHRHVYYSNYATY 332
AH HAAH H Y+ N A Y
Sbjct: 378 AHAAHAHAAHAHAYHHNMAQY 398
>AE013599-1607|AAF58444.1| 453|Drosophila melanogaster CG3830-PA
protein.
Length = 453
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 270 AHGRPLHAAHRHVYYSNYATY 332
AH HAAH H Y+ N A Y
Sbjct: 378 AHAAHAHAAHAHAYHHNMAQY 398
>Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma
pigmentosum group Ccomplementing factor protein.
Length = 1293
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 15 SLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAP 146
S + D A TK ++S+L VT QNI +SK + +AP
Sbjct: 704 SKLEDKKVASSAETKTKVQSSLLKRVTTQNISESGDSKKSKVAP 747
>BT004481-1|AAO42645.1| 771|Drosophila melanogaster LD34250p
protein.
Length = 771
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 111 PKPESKLAPLAPYVSPREQTRARVLSTVGQRERAFEADPLG 233
P P A + Y +P E T+ +LS + ERA DPLG
Sbjct: 606 PSPAEATAEDSDYYTP-EDTQNSILSPLCPTERAKSGDPLG 645
>AE014298-1948|AAF48305.1| 789|Drosophila melanogaster CG9941-PA
protein.
Length = 789
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 111 PKPESKLAPLAPYVSPREQTRARVLSTVGQRERAFEADPLG 233
P P A + Y +P E T+ +LS + ERA DPLG
Sbjct: 624 PSPAEATAEDSDYYTP-EDTQNSILSPLCPTERAKSGDPLG 663
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 15 SLVPDPVT-AFGRRTKPGTRASVL-DPVTKQNIPPKPESKLAPLAPYVSP 158
S+VP + F R T R +++ DP PP P + +AP+AP V+P
Sbjct: 384 SIVPSSGSNPFKRSTGLNKRVNIMADPAAGAPSPPAPAAAIAPVAP-VAP 432
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 15 SLVPDPVT-AFGRRTKPGTRASVL-DPVTKQNIPPKPESKLAPLAPYVSP 158
S+VP + F R T R +++ DP PP P + +AP+AP V+P
Sbjct: 384 SIVPSSGSNPFKRSTGLNKRVNIMADPAAGAPSPPAPAAAIAPVAP-VAP 432
>BT023819-1|AAZ86740.1| 741|Drosophila melanogaster SD06601p
protein.
Length = 741
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 66 TRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVG 197
T + P T+ P +AP +P + PR + +R S+VG
Sbjct: 71 TATATAGPATRTRASPSRNKVVAPPSPDLGPRTRRSSRPRSSVG 114
>AY070562-1|AAL48033.1| 716|Drosophila melanogaster LD38760p
protein.
Length = 716
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 66 TRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVG 197
T + P T+ P +AP +P + PR + +R S+VG
Sbjct: 46 TATATAGPATRTRASPSRNKVVAPPSPDLGPRTRRSSRPRSSVG 89
>AJ606680-1|CAE54809.1| 741|Drosophila melanogaster lamin B
receptor protein.
Length = 741
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 66 TRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVG 197
T + P T+ P +AP +P + PR + +R S+VG
Sbjct: 71 TATATAGPATRTRASPSRNKVVAPPSPDLGPRTRRSSRPRSSVG 114
>AE013599-3273|AAM71016.1| 716|Drosophila melanogaster CG17952-PB,
isoform B protein.
Length = 716
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 66 TRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVG 197
T + P T+ P +AP +P + PR + +R S+VG
Sbjct: 46 TATATAGPATRTRASPSRNKVVAPPSPDLGPRTRRSSRPRSSVG 89
>AE013599-3272|AAF46760.2| 716|Drosophila melanogaster CG17952-PA,
isoform A protein.
Length = 716
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 66 TRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVG 197
T + P T+ P +AP +P + PR + +R S+VG
Sbjct: 46 TATATAGPATRTRASPSRNKVVAPPSPDLGPRTRRSSRPRSSVG 89
>AE013599-3271|AAM71015.1| 741|Drosophila melanogaster CG17952-PC,
isoform C protein.
Length = 741
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 66 TRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVG 197
T + P T+ P +AP +P + PR + +R S+VG
Sbjct: 71 TATATAGPATRTRASPSRNKVVAPPSPDLGPRTRRSSRPRSSVG 114
>AE014298-3206|ABI30999.1| 517|Drosophila melanogaster CG41474-PA
protein.
Length = 517
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +2
Query: 47 AAHQAGHARLRVGPRHQTKHPAETGVEVGASRALRISARTNARACSFYRWT 199
A AG LR G H T+ PA+ ++R RI R R + RWT
Sbjct: 330 ACLDAGLQVLRAGITHTTRCPAQMN---RSARTSRIRVRRKNRTHTLARWT 377
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,985,422
Number of Sequences: 53049
Number of extensions: 325620
Number of successful extensions: 1203
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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