Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_F21
(643 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 38 0.007
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36... 36 0.027
11_03_0201 + 11578163-11578915 31 0.59
03_04_0037 + 16694760-16695227,16695563-16695642,16695735-166958... 31 0.59
12_02_0637 - 21437244-21438080 31 0.78
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 31 0.78
10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834 31 0.78
10_02_0198 - 6611775-6612611 31 0.78
08_02_0235 + 14627648-14628889 31 0.78
07_01_1086 - 9930311-9931993 31 0.78
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 31 0.78
09_02_0555 - 10588685-10592038 31 1.0
06_02_0319 + 14306464-14306577,14306623-14307117 31 1.0
03_02_1029 - 13488535-13493037 31 1.0
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 30 1.4
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 30 1.4
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 30 1.8
10_01_0300 - 3257584-3258825 29 2.4
01_04_0007 - 15038268-15039062,15039177-15039711,15039887-150399... 29 2.4
12_02_0214 + 15750620-15751273 29 4.1
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 28 5.5
01_01_0888 + 6990354-6991862,6991970-6992431 28 5.5
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 28 7.2
08_01_0749 + 7063297-7064370 27 9.6
>03_02_0234 +
6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 183 KNGVLEYYLKWKGYSDEXNTWXPEDNL-DCPDLIQ 284
KNG L + ++WKGY +TW P D L DCP+ I+
Sbjct: 576 KNG-LWFKVRWKGYDPSYDTWEPIDGLSDCPERIK 609
>10_01_0028 -
359988-359996,360228-360332,360415-360536,360676-360763,
360988-361056,361132-361461,361544-361610,361695-361753,
361838-362056,362224-362289,362370-362500,362683-362782,
362864-363001,363111-363218,363627-363723,363806-364257
Length = 719
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 195 LEYYLKWKGYSDEXNTWXPEDNL-DCP 272
L + ++WKGY E +TW P +NL DCP
Sbjct: 434 LYFKVQWKGYGREEDTWEPIENLRDCP 460
>11_03_0201 + 11578163-11578915
Length = 250
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 DRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
+RR +N V +Y ++W +S+E TW ED L
Sbjct: 199 ERRTRNKVTRFYRVQWSHHSEEEATWEREDEL 230
>03_04_0037 +
16694760-16695227,16695563-16695642,16695735-16695828,
16695973-16696071,16696650-16696742,16696822-16696941,
16697422-16697525,16697734-16697806,16698023-16698085
Length = 397
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 4 PADDSGLRDLCNIIVPVYVFCQSELNNCL 90
PADD+ +DLC + P+ +SE+NN L
Sbjct: 149 PADDTAKQDLCEVFTPLTNEEESEVNNIL 177
>12_02_0637 - 21437244-21438080
Length = 278
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 DRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
+RR +N V+ + ++W +S+E +TW ED L
Sbjct: 227 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 258
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 DRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
+RR +N V+ + ++W +S+E +TW ED L
Sbjct: 530 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 561
>10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834
Length = 324
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 DRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
+RR +N V+ + ++W +S+E +TW ED L
Sbjct: 273 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 304
>10_02_0198 - 6611775-6612611
Length = 278
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 DRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
+RR +N V+ + ++W +S+E +TW ED L
Sbjct: 227 ERRTRNRVIHFCKVQWSNHSEEESTWEREDEL 258
>08_02_0235 + 14627648-14628889
Length = 413
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 DRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
+RR +N V+ + ++W +S+E +TW ED L
Sbjct: 362 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 393
>07_01_1086 - 9930311-9931993
Length = 560
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 DRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
+RR +N V+ + ++W +S+E +TW ED L
Sbjct: 509 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 540
>04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 DRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
+RR +N V+ + ++W +S+E +TW ED L
Sbjct: 1237 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 1268
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 168 LDRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNLDC--PDL 278
++RR +N V+ + ++W +++E TW ED L PDL
Sbjct: 1065 MERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDL 1104
>06_02_0319 + 14306464-14306577,14306623-14307117
Length = 202
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 168 LDRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNLDC--PDL 278
++RR +N V+ + ++W +++E TW ED L PDL
Sbjct: 150 IERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDL 189
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 168 LDRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNLDC--PDL 278
++RR +N V+ + ++W +++E TW ED L PDL
Sbjct: 1448 MERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDL 1487
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +3
Query: 168 LDRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNLDC--PDL 278
++RR +N V+ + ++W +++E TW ED L PDL
Sbjct: 622 MERRTRNRVIRFCKVQWSNHAEEEATWEREDELKTAHPDL 661
>05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 183 KNGVLEYYLKWKGYSDEXNTWXPEDNL-DCPDLIQ 284
K+G L + ++WKGY +TW P + L +C + I+
Sbjct: 953 KHG-LYFKVRWKGYGPHHDTWEPVEGLRNCKEAIR 986
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 165 VLDRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
V +R +N V+ + ++W +S+E +TW ED L
Sbjct: 1623 VSERNTRNRVIRFCKVQWSNHSEEESTWEREDEL 1656
>10_01_0300 - 3257584-3258825
Length = 413
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 DRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
+RR +N V+ + ++W +S+E +TW ED L
Sbjct: 362 ERRTRNRVICFCKVQWSNHSEEESTWEREDEL 393
>01_04_0007 -
15038268-15039062,15039177-15039711,15039887-15039936,
15040376-15040446,15040683-15040731
Length = 499
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 171 DRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
+RR +N V + ++W +SDE TW ED L
Sbjct: 448 ERRTRNKVTSFCRVQWSHHSDEEATWEREDEL 479
>12_02_0214 + 15750620-15751273
Length = 217
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 165 VLDRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
V +R +N V+ + ++W +S+E TW ED L
Sbjct: 164 VSERNTRNRVIRFCKVQWSNHSEEEATWEREDEL 197
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 174 RRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
RR +N V+ + ++W +S+E TW ED L
Sbjct: 523 RRTRNKVIRFCKVQWSHHSEEEATWEREDEL 553
>01_01_0888 + 6990354-6991862,6991970-6992431
Length = 656
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -3
Query: 587 IKLNNYLWAPHISLXCWYKMWFICSLPFHEE---HEFTTTIRSANYFF 453
+K+N LW ++L C + C + F+ E E+ +R N+FF
Sbjct: 299 VKINLVLWCVSVALMCAVSALYACKVAFYFEAVRREYYHPVR-VNFFF 345
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 174 RRIKNGVLEYYLKWKGYSDEXNTWXPEDNL 263
R+ G EYY+KWK + + TW + ++
Sbjct: 160 RKSSTGEREYYVKWKELTYDECTWENDSDI 189
>08_01_0749 + 7063297-7064370
Length = 357
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 165 VLDRRIKNGVLEYY-LKWKGYSDEXNTWXPEDNL 263
V +R +N V + ++W +S+E TW ED L
Sbjct: 304 VSERNTRNRVTRFCKVQWSNHSEEEATWEREDEL 337
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,906,485
Number of Sequences: 37544
Number of extensions: 220042
Number of successful extensions: 505
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -