Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F18
         (647 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_53726| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_45598| Best HMM Match : Peptidase_C5 (HMM E-Value=0.3)              27   9.9  

>SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 811

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 21/77 (27%), Positives = 35/77 (45%)
 Frame = +2

Query: 164 KLYNIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKV 343
           +L++ G     +++C ++     Q E  +  QD  +  + SV + M   GL       + 
Sbjct: 568 RLFSKGASEILLSRCTSIIGRNGQPEPFS-SQDCLSLVQ-SVIEPMASDGLRTICMAYRD 625

Query: 344 FPPSTVDIPSGWDVEKG 394
           FPP+  D P  WD E G
Sbjct: 626 FPPTDDDTPPDWDDEAG 642


>SB_53726| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 837

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 229 QSVRSGSTGPGSFH*IQV*CRSTYGTCWPECC*CHCQGLP 348
           QS+ +GS  P S     V C S   +C   C  CHC+  P
Sbjct: 640 QSIDAGSEVPKSAKKQSVSCVSVASSCLEICRICHCEAEP 679


>SB_45598| Best HMM Match : Peptidase_C5 (HMM E-Value=0.3)
          Length = 604

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +2

Query: 146 LILRVAKLYNIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSV 322
           L LR  ++ N G +T+ + +      +  QSE  A DQD + +    VD + E    +V
Sbjct: 23  LTLRPTRVSNWGQLTAHLKEVVDHFAFTRQSERLAFDQD-YLDLHVDVDTINEKVTFTV 80


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,577,024
Number of Sequences: 59808
Number of extensions: 372779
Number of successful extensions: 884
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)