Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F17
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     27   0.44 
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   1.8  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   9.6  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   9.6  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   9.6  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   9.6  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   9.6  

>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 27.5 bits (58), Expect = 0.44
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 219 HATTWNTYSEWSHHGSQKTS*LSLSTGPGRS 311
           +AT W  Y+E+SH    K   +S  T P R+
Sbjct: 267 NATVWENYAEFSHTDVHKQVAISFRTPPYRT 297


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 196  LTKQDYTYMQQLGTLTASGLIMEVKKLHDL-AYQLGLEEAKEMTRGKYL 339
            L +QDY     + T+   G   + K+LH    +QL LE   +++   +L
Sbjct: 930  LAQQDYQLNCNIKTVDGKGATWKQKELHGTHTHQLNLEHIDKVSSSTWL 978


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 255 ETTRCKCSKLLHVSVVLFCETFIPGRLLRAWHRCKLRY 142
           +  +CK   L+     +     I G L+   +RCK+ Y
Sbjct: 146 QNLQCKEINLIAAGFTIAASIIIGGLLMLFCYRCKIMY 183


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 255 ETTRCKCSKLLHVSVVLFCETFIPGRLLRAWHRCKLRY 142
           +  +CK   L+     +     I G L+   +RCK+ Y
Sbjct: 146 QNLQCKEINLIAAGFTIAASIIIGGLLMLFCYRCKIMY 183


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 255 ETTRCKCSKLLHVSVVLFCETFIPGRLLRAWHRCKLRY 142
           +  +CK   L+     +     I G L+   +RCK+ Y
Sbjct: 146 QNLQCKEINLIAAGFTIAASIIIGGLLMLFCYRCKIMY 183


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 255 ETTRCKCSKLLHVSVVLFCETFIPGRLLRAWHRCKLRY 142
           +  +CK   L+     +     I G L+   +RCK+ Y
Sbjct: 146 QNLQCKEINLIAAGFTIAASIIIGGLLMLFCYRCKIMY 183


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 255 ETTRCKCSKLLHVSVVLFCETFIPGRLLRAWHRCKLRY 142
           +  +CK   L+     +     I G L+   +RCK+ Y
Sbjct: 722 QNLQCKEINLIAAGFTIAASIIIGGLLMLFCYRCKIMY 759


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,975
Number of Sequences: 2352
Number of extensions: 14262
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)