Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F17
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   1.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   6.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   6.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.9  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 203 NRTTLTCNNLEHLQRVVSSWKSKNF 277
           N    + NNL H  +V+  WK  +F
Sbjct: 24  NHQRKSANNLAHSMKVIYEWKHIDF 48


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 262 EVKKLHDLAYQLGLEEAKEMTRGKYL 339
           +V    +LAY++GLE    +  G++L
Sbjct: 199 KVTGFEELAYKMGLESTCTLILGRHL 224


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 188  FQEGSCVPGIGANSDTPGTVKES 120
            FQEG  V G G     PG V +S
Sbjct: 959  FQEGQTVSGGGMGGCQPGGVVQS 981


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +1

Query: 214 TYMQQLGTLTASGLIMEVKKLHDLAYQLGLEE 309
           TY +Q  T   +GL++E ++  D  + + + +
Sbjct: 461 TYFEQFDTTINNGLLLEEQRNDDKPFLIKIRQ 492


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +1

Query: 214 TYMQQLGTLTASGLIMEVKKLHDLAYQLGLEE 309
           TY +Q  T   +GL++E ++  D  + + + +
Sbjct: 461 TYFEQFDTTINNGLLLEEQRNDDKPFLIKIRQ 492


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 182  EGSCVPGIGANSDTPGTVKESLEH*DSSSEVRLTLFFSI 66
            +G+ VPG G  SD P  + E+    DS  +++L L  S+
Sbjct: 1868 QGNVVPGNGDRSDRP-ELSEAECDIDSLKKLKLGLRSSL 1905


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 182  EGSCVPGIGANSDTPGTVKESLEH*DSSSEVRLTLFFSI 66
            +G+ VPG G  SD P  + E+    DS  +++L L  S+
Sbjct: 1864 QGNVVPGNGDRSDRP-ELSEAECDIDSLKKLKLGLRSSL 1901


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 227 NLEHLQRVVSSWK 265
           NLEH   V+  WK
Sbjct: 30  NLEHSMNVIHEWK 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,120
Number of Sequences: 438
Number of extensions: 3742
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)