Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_F_F16
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098499-1|AAC67397.1| 245|Caenorhabditis elegans Hypothetical ... 33 0.21
Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 29 2.5
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 29 2.5
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 29 3.4
AF025457-6|AAB70960.1| 333|Caenorhabditis elegans Hypothetical ... 29 3.4
Z92830-12|CAE17777.1| 191|Caenorhabditis elegans Hypothetical p... 28 5.9
AC024751-10|AAY55884.1| 654|Caenorhabditis elegans Hypothetical... 28 7.8
AC006776-1|AAF60626.2| 616|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF098499-1|AAC67397.1| 245|Caenorhabditis elegans Hypothetical
protein C43H8.2 protein.
Length = 245
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 457 MKLLESGRLEALSRALSILNGDSAVQGRVESYSCKMAGSEKAFYK 591
MK LES ++ S+ L D + ++E+YS KM SEK +K
Sbjct: 1 MKFLESSEMDVFSQTLVTGAIDCVIDFKLETYSSKMVTSEKKQWK 45
>Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical
protein T22C8.5 protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 562 MAGSEKAFYKKFTADGETTHSLQALSPPES-VTYSRSLSGDEXG 690
M G+ F++ + + G HSL ++SPP+S + S S S G
Sbjct: 1 MDGAATKFFRPWESHGSYHHSLPSISPPDSPASTSASSSSSSIG 44
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 523 SAVQGRVESYSCKMAGSEKAFYKKFTA--DGETTHSLQALSPPESVTYSRSLSGDEXGVL 696
S VQ ++E + C+M K Y K D E + A P S + +SG++ +L
Sbjct: 415 SVVQIKIEEWLCRMIEQIKEEYMKKDGLVDPEEIKRIFANDPVLSFVAPKIMSGEQNHML 474
Query: 697 CDTISR 714
DTI +
Sbjct: 475 KDTIKK 480
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 523 SAVQGRVESYSCKMAGSEKAFYKKFTA--DGETTHSLQALSPPESVTYSRSLSGDEXGVL 696
S VQ ++E + C+M K Y K D E + A P S + +SG++ +L
Sbjct: 415 SVVQIKIEEWLCRMIEQIKEEYMKKDGLVDPEEIKRIFANDPVLSFVAPKIMSGEQNHML 474
Query: 697 CDTISR 714
DTI +
Sbjct: 475 KDTIKK 480
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 628 EDYE*FLHQQ*TSYRKLSHCQPFCSCSFQRGLVQH 524
E YE F+++ +RK C PFC+ R ++H
Sbjct: 2189 ESYETFVNEYIHRWRKFGMCSPFCNEDETRVFLEH 2223
>AF025457-6|AAB70960.1| 333|Caenorhabditis elegans Hypothetical
protein C08E3.7 protein.
Length = 333
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 469 ESGRLEALSRALSILNGDSAVQGRVESYSCKMAGSEKAFYKKFTADG--ETTHSLQALSP 642
E LE ++ L ++ + V+ S+ ++G E KKF DG ET S ++L+
Sbjct: 120 EENYLELCNKDLKLMMENRKVE--FYSFGVSISGIETELSKKFI-DGIEETMKSAKSLTS 176
Query: 643 PESVTYSRSLSG 678
TY+ SLSG
Sbjct: 177 RTVATYNTSLSG 188
>Z92830-12|CAE17777.1| 191|Caenorhabditis elegans Hypothetical
protein F11A5.15 protein.
Length = 191
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -1
Query: 469 PIVSFSLILFCSNYPINRLVIIGAFIFILHHKLFLYIA---VGCMNIPFLFECK 317
P+++ S++ FC+ + + L I I++ KLF I V C+N +F+ K
Sbjct: 138 PLITISVLFFCAFFILIFLFCILGSIYVFMAKLFRNIEQTYVACLNRLMIFDEK 191
>AC024751-10|AAY55884.1| 654|Caenorhabditis elegans Hypothetical
protein Y18H1A.15 protein.
Length = 654
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 581 LSIRSLLLMEKLLIVFKHCLPLRVLLIAGACLVTXMVCY 697
L+ RS + L IVF+H +R ++I+ CL+T ++ +
Sbjct: 77 LNGRSSGYSDVLAIVFRHLPTIRQIIISVLCLITALLIF 115
>AC006776-1|AAF60626.2| 616|Caenorhabditis elegans Hypothetical
protein Y46H3C.4 protein.
Length = 616
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 424 SDNLNRIKSE-KMKLLESGRLEALSRALSILNGDSAVQGRVESYSCKMAGSEKAF 585
+D + + K E K+KL ESG ++ A + D V ++ K++G E F
Sbjct: 355 ADPVKKWKEEQKLKLRESGEMDEDDLATVAVEDDEGVSSAAKAVETKLSGYEYLF 409
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,774,298
Number of Sequences: 27780
Number of extensions: 330051
Number of successful extensions: 943
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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