Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F14
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    27   0.86 
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    26   1.1  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   2.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   2.0  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    25   2.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   6.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.0  

>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = -3

Query: 461 VCRR--PQRYKSVGGAA--GPTWRRREPRGASTT 372
           +C+R    +  S GG A  GP W+++ P+G  TT
Sbjct: 223 LCKRILASKTSSSGGPARNGPEWQQKGPKGPGTT 256


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +2

Query: 299 RPTITCTRKYMDTDNFCRSIEQK*GWSMPHAAPVSAMSAPPRH 427
           RP   CT    + +N CR  EQ+   + P    +SA+    RH
Sbjct: 292 RPAYWCTPAIEELENECRIAEQR-QLASPTDPDISALDRQARH 333


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 457 HTLHHPQALPEPQT 498
           H  HHPQ  P PQT
Sbjct: 108 HHQHHPQQQPSPQT 121


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 457 HTLHHPQALPEPQT 498
           H  HHPQ  P PQT
Sbjct: 108 HHQHHPQQQPSPQT 121


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
 Frame = -1

Query: 457 VADLNGIKVWVARRGRHGGDGSRVGHRPPLLLFNRATEVVRVHIFSCAGYCRSVAACIT- 281
           +  +  +K  + R GRH G  +  GH     LF    E ++ H      Y   + + +T 
Sbjct: 196 LVQIAALKQRLGRLGRHSGTMASTGHSAG-TLFAELKECLKYH-KQIIQYVHDLNSLVTH 253

Query: 280 ISVLVLHGRLMLLRSLNRRIIPSDRETLIEVLVAVHVFQLTYQSHA*YFYYNTI 119
           + +L      M+L +L   ++    +    +++  ++F +  Q  A Y++ N +
Sbjct: 254 LCLLEFLSFGMMLCAL-LFLLSISNQLAQMIMIGSYIFMILSQMFAFYWHANEV 306


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +3

Query: 336 RTTSVALLNKSRGGRCPTRLPSPPCRPRR 422
           R  + A +   RGG      PSPP  P R
Sbjct: 55  RAATTATIVDGRGGDYADSAPSPPTPPTR 83


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 377 SMPHAAPVSAMSAPPRHPH 433
           +M  A+P+S  S  P HPH
Sbjct: 785 AMAAASPLSLSSKAPPHPH 803


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,134
Number of Sequences: 2352
Number of extensions: 16172
Number of successful extensions: 72
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)