Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F10
         (661 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch...    27   3.2  
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca...    27   3.2  
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy...    25   7.3  

>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 642

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +1

Query: 400 VYDENTGDHKTQHELSDGSVVRGGYSLIQPDGYIREVKYVADDLTGFNAVVKKFLPVNVE 579
           + DE T   KT  +LSD   +     L + + +I  ++ V DDL    +  K+ L  +V+
Sbjct: 93  ILDELTRSSKTHQKLSDDYSLDIAEKLKKLESHIEALRKVYDDLYKKFSSEKETLLNSVK 152

Query: 580 K-KIEQHE 600
           + K+  HE
Sbjct: 153 RAKVSYHE 160


>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
            synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 2410

 Score = 26.6 bits (56), Expect = 3.2
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 351  YWNAGLIRYYICSGRGY*LPRIYTGRSTWRD*IWYY*SXQGLQIFGLVVILLRRLMERHI 172
            +W    I  Y+    GY  P  Y GR+ W   +W       +Q  G+ +ILL+ L  RH+
Sbjct: 2280 FWATSNIGLYL-PWAGYSGP--YLGRTLW---LWLG-VLDAIQSVGIGMILLQTLTRRHV 2332

Query: 171  VS 166
             S
Sbjct: 2333 AS 2334


>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 613

 Score = 25.4 bits (53), Expect = 7.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 167 VFNWHYFSSALYEYFRE*STSYNINCGD 84
           VFN H++SS + E   + +  +NI+  D
Sbjct: 198 VFNAHFYSSIMNEVAEKANAGFNISLSD 225


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,425,499
Number of Sequences: 5004
Number of extensions: 45529
Number of successful extensions: 95
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)