Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F10
         (661 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0006 - 22102663-22103705,22105659-22105671                       31   0.61 
02_03_0387 - 18412064-18412144,18412280-18412361,18412922-184131...    29   2.5  
09_02_0106 + 4347024-4347536,4349619-4349700,4350499-4350747,435...    29   3.3  
09_04_0163 - 15249816-15249920,15250032-15250163,15250463-152506...    29   4.3  
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851...    28   7.6  
07_03_0705 - 20846810-20848165                                         28   7.6  
05_07_0334 - 29358823-29360247                                         28   7.6  

>04_04_0006 - 22102663-22103705,22105659-22105671
          Length = 351

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 387 FVTGSVLFICDNYWNAGLIRYYICSGRGY*LPRIY 283
           FV G   FI D  W A + ++YI S  G+  P ++
Sbjct: 118 FVNGEGRFISDQTWQANVCKFYIVSNLGFAEPGLF 152


>02_03_0387 -
           18412064-18412144,18412280-18412361,18412922-18413142,
           18413387-18413745,18413834-18414443,18414546-18414605,
           18414685-18414751,18414843-18414936,18415012-18415125,
           18415242-18415308,18415386-18415551,18416587-18417080
          Length = 804

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 484 QPDGYIREVKYVADDLTGFNAVVKKFLPVNVEKKIEQHEKSHPDPPCHE 630
           + D  I       DD++G  AVVK+   V V  K E+ E+  PD   HE
Sbjct: 571 EDDDMIMSDTVAKDDMSGL-AVVKEETSVEVPVKNEEEEELKPDEIVHE 618


>09_02_0106 +
           4347024-4347536,4349619-4349700,4350499-4350747,
           4351594-4351646,4353064-4353159,4353289-4353423
          Length = 375

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 505 EVKYVADDLTGFNAVVKKFLPVNVEKKIEQHEKSHP 612
           E  Y A+D+TG      KF+ VN     E+H+   P
Sbjct: 318 EGPYDAEDITGHTTDKTKFILVNYSNSSEEHKSQDP 353


>09_04_0163 -
           15249816-15249920,15250032-15250163,15250463-15250629,
           15251259-15251448,15252530-15252661,15253275-15253382,
           15253513-15253608,15253702-15253809,15253917-15254089,
           15255026-15255401,15255887-15256030,15256125-15256799,
           15256917-15256982,15257082-15257249
          Length = 879

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 505 EVKYVADDLTGFNAVVKKFLPVNVEKKIEQHEKSHP 612
           E  Y A+D+TG      KF+ VN     E+H    P
Sbjct: 589 EGPYDAEDITGHTTDKTKFILVNYSNSSEEHNSQDP 624


>09_02_0393 +
           8510089-8510274,8510450-8510806,8510889-8511011,
           8511209-8511523,8511576-8511682,8512559-8512629,
           8512952-8513029,8513390-8513454,8514224-8514274,
           8514373-8514414,8514785-8515105,8515154-8517880
          Length = 1480

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 271 HMARLDLVLLILXGAADIWASCDPATAIDGAP 176
           H  RL + +LI+    D++   +P T +DG P
Sbjct: 360 HKERLSIDVLIIHPFVDLFCGGNPVTKVDGPP 391


>07_03_0705 - 20846810-20848165
          Length = 451

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 232 GAADIWASCDPAT---AIDGAPYCKYSTGTTSRPPCTNTL 122
           G++ IW  C P T   A    P+   S+ T S+ PC ++L
Sbjct: 110 GSSLIWTQCAPCTECAARPAPPFQPASSSTFSKLPCASSL 149


>05_07_0334 - 29358823-29360247
          Length = 474

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +3

Query: 51  VNIFVAVFILGVSAINVVTGASFSKVFVQGGREVVPVEYLQYGAPSI 191
           VN F+AV +   SA+   TG+   KV   G  + V V Y  +G P +
Sbjct: 122 VNNFLAVLLGNRSAL---TGSGSGKVVASGPNDHVFVYYADHGGPGV 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,968,957
Number of Sequences: 37544
Number of extensions: 299483
Number of successful extensions: 742
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)