Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F10
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U00036-8|AAL06052.1|  318|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U00036-7|AAK29858.2|  319|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -2

Query: 372 VLFICDNYWNAGLIRYYICSGRGY*LPRIYTGRSTWRD*IWY 247
           V F C  ++    + Y+I  G  + + R+ T RS W   +W+
Sbjct: 381 VAFRC--FYPVMFVLYFIFGGTFFAVSRLITNRSAWNTALWF 420


>U00036-8|AAL06052.1|  318|Caenorhabditis elegans Hypothetical
           protein R151.2c protein.
          Length = 318

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 247 LLILXGAADIWASCDPATAIDGAPYCKYSTGTTSRPPCTNTL 122
           LLI+  A  I +SC  A  I   PY +      SR P +  L
Sbjct: 69  LLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKL 110


>U00036-7|AAK29858.2|  319|Caenorhabditis elegans Hypothetical
           protein R151.2b protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 247 LLILXGAADIWASCDPATAIDGAPYCKYSTGTTSRPPCTNTL 122
           LLI+  A  I +SC  A  I   PY +      SR P +  L
Sbjct: 70  LLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKL 111


>U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical
           protein R151.2a protein.
          Length = 377

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 247 LLILXGAADIWASCDPATAIDGAPYCKYSTGTTSRPPCTNTL 122
           LLI+  A  I +SC  A  I   PY +      SR P +  L
Sbjct: 128 LLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKL 169


>U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical
           protein R151.2d protein.
          Length = 446

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 247 LLILXGAADIWASCDPATAIDGAPYCKYSTGTTSRPPCTNTL 122
           LLI+  A  I +SC  A  I   PY +      SR P +  L
Sbjct: 197 LLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKL 238


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,644,612
Number of Sequences: 27780
Number of extensions: 261226
Number of successful extensions: 644
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)