Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F08
         (561 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141     29   3.4  
05_04_0278 - 19694590-19694757,19696331-19696391,19696503-196966...    28   4.4  

>04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141
          Length = 606

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +2

Query: 134 DIKSILWVERHCRSSCSSNVAFINH 208
           D++++LW+E +  + C S +  ++H
Sbjct: 268 DLRAVLWLEEYLTAQCKSTLVVVSH 292


>05_04_0278 -
           19694590-19694757,19696331-19696391,19696503-19696658,
           19696740-19696912,19698199-19698276,19698399-19698575,
           19698924-19699001,19700573-19700692,19700803-19701183
          Length = 463

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 174 ERQCLSTQRMLFISAFPWSDITHINSEGRFHCF 76
           +R+CLST+    +       ITHI+S G   CF
Sbjct: 281 DRRCLSTEEPAGVLTGHLHGITHIDSRGDGRCF 313


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,176,356
Number of Sequences: 37544
Number of extensions: 219562
Number of successful extensions: 451
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)