Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_F_F08
         (561 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.8  
EF519472-2|ABP73554.1|  177|Anopheles gambiae CTL4 protein.            23   9.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.0  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -1

Query: 378  LAIFIKMFIISL---PKGLKCYHTFVPRTLKAMRDETV 274
            L I ++ F++SL   P    CY T +P T+    + TV
Sbjct: 932  LNIHVRFFMLSLENKPHVFDCYTTVIPHTVLTQYNYTV 969


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = -1

Query: 153 QRMLFISAFP---WSDITHINSEGRF 85
           +R+LF + F    +SD+ H+NS G F
Sbjct: 236 ERILFGNIFDSTEYSDMLHLNSSGMF 261


>EF519472-2|ABP73554.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +2

Query: 347 EIINIFIKIASVVICCVLIN 406
           +I NIF+ I  + + C++++
Sbjct: 2   QISNIFVSIIGITLVCLIVS 21


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = -1

Query: 153 QRMLF---ISAFPWSDITHINSEGRF 85
           +R+LF   + +  +SD+ H+NS G F
Sbjct: 236 ERILFGNILDSTEYSDMLHLNSSGMF 261


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,010
Number of Sequences: 2352
Number of extensions: 11160
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)